Giorgio Casaburi, Ph.D.

Associate Vice President, Bioinformatics & Data Analytics

Research Expertise

NGS
Bioinformatics
Metaomics
Machine Learning
Precision Medicine
Microbiology
Molecular Biology
Hepatology
Gastroenterology
Pediatrics, Perinatology and Child Health
Infectious Diseases
Public Health, Environmental and Occupational Health
Pharmacology (medical)
Microbiology (medical)
Biotechnology
Biomedical Engineering
Biochemistry
Bioengineering
Nutrition and Dietetics
Food Science
Endocrinology, Diabetes and Metabolism
Ecology, Evolution, Behavior and Systematics
Space and Planetary Science
Genetics
Cancer Research
Oncology
Computational Mathematics
Statistics and Probability
Computer Science Applications
Computational Theory and Mathematics
Aquatic Science
Clinical Biochemistry
Catalysis
Organic Chemistry
Spectroscopy
Inorganic Chemistry
Physical and Theoretical Chemistry
Pediatrics
Critical Care Nursing
Maternity and Midwifery
Epidemiology
Developmental Biology

Publications

Persistence of Supplemented Bifidobacterium longum subsp. infantis EVC001 in Breastfed Infants

mSphere / Dec 27, 2017

Frese, S. A., Hutton, A. A., Contreras, L. N., Shaw, C. A., Palumbo, M. C., Casaburi, G., Xu, G., Davis, J. C. C., Lebrilla, C. B., Henrick, B. M., Freeman, S. L., Barile, D., German, J. B., Mills, D. A., Smilowitz, J. T., & Underwood, M. A. (2017). Persistence of Supplemented Bifidobacterium longum subsp. infantis EVC001 in Breastfed Infants. MSphere, 2(6). https://doi.org/10.1128/msphere.00501-17

Metagenomics Reveals Dysbiosis and a Potentially Pathogenic N. flavescens Strain in Duodenum of Adult Celiac Patients

American Journal of Gastroenterology / Jun 01, 2016

D’Argenio, V., Casaburi, G., Precone, V., Pagliuca, C., Colicchio, R., Sarnataro, D., Discepolo, V., Kim, S. M., Russo, I., Del Vecchio Blanco, G., Horner, D. S., Chiara, M., Pesole, G., Salvatore, P., Monteleone, G., Ciacci, C., Caporaso, G. J., Jabrì, B., Salvatore, F., & Sacchetti, L. (2016). Metagenomics Reveals Dysbiosis and a Potentially Pathogenic N. flavescens Strain in Duodenum of Adult Celiac Patients. American Journal of Gastroenterology, 111(6), 879–890. https://doi.org/10.1038/ajg.2016.95

New multi-scale perspectives on the stromatolites of Shark Bay, Western Australia

Scientific Reports / Feb 03, 2016

Suosaari, E. P., Reid, R. P., Playford, P. E., Foster, J. S., Stolz, J. F., Casaburi, G., Hagan, P. D., Chirayath, V., Macintyre, I. G., Planavsky, N. J., & Eberli, G. P. (2016). New multi-scale perspectives on the stromatolites of Shark Bay, Western Australia. Scientific Reports, 6(1). https://doi.org/10.1038/srep20557

Symbiotic organs shaped by distinct modes of genome evolution in cephalopods

Proceedings of the National Academy of Sciences / Jan 11, 2019

Belcaid, M., Casaburi, G., McAnulty, S. J., Schmidbaur, H., Suria, A. M., Moriano-Gutierrez, S., Pankey, M. S., Oakley, T. H., Kremer, N., Koch, E. J., Collins, A. J., Nguyen, H., Lek, S., Goncharenko-Foster, I., Minx, P., Sodergren, E., Weinstock, G., Rokhsar, D. S., McFall-Ngai, M., … Nyholm, S. V. (2019). Symbiotic organs shaped by distinct modes of genome evolution in cephalopods. Proceedings of the National Academy of Sciences, 116(8), 3030–3035. https://doi.org/10.1073/pnas.1817322116

Elevated Fecal pH Indicates a Profound Change in the Breastfed Infant Gut Microbiome Due to Reduction of Bifidobacterium over the Past Century

mSphere / Apr 25, 2018

Henrick, B. M., Hutton, A. A., Palumbo, M. C., Casaburi, G., Mitchell, R. D., Underwood, M. A., Smilowitz, J. T., & Frese, S. A. (2018). Elevated Fecal pH Indicates a Profound Change in the Breastfed Infant Gut Microbiome Due to Reduction of Bifidobacterium over the Past Century. MSphere, 3(2). https://doi.org/10.1128/msphere.00041-18

Colonization by B. infantis EVC001 modulates enteric inflammation in exclusively breastfed infants

Pediatric Research / Aug 23, 2019

Henrick, B. M., Chew, S., Casaburi, G., Brown, H. K., Frese, S. A., Zhou, Y., Underwood, M. A., & Smilowitz, J. T. (2019). Colonization by B. infantis EVC001 modulates enteric inflammation in exclusively breastfed infants. Pediatric Research, 86(6), 749–757. https://doi.org/10.1038/s41390-019-0533-2

The Personal Human Oral Microbiome Obscures the Effects of Treatment on Periodontal Disease

PLoS ONE / Jan 29, 2014

Schwarzberg, K., Le, R., Bharti, B., Lindsay, S., Casaburi, G., Salvatore, F., Saber, M. H., Alonaizan, F., Slots, J., Gottlieb, R. A., Caporaso, J. G., & Kelley, S. T. (2014). The Personal Human Oral Microbiome Obscures the Effects of Treatment on Periodontal Disease. PLoS ONE, 9(1), e86708. https://doi.org/10.1371/journal.pone.0086708

Comparative Metagenomic Analysis of Human Gut Microbiome Composition Using Two Different Bioinformatic Pipelines

BioMed Research International / Jan 01, 2014

D’Argenio, V., Casaburi, G., Precone, V., & Salvatore, F. (2014). Comparative Metagenomic Analysis of Human Gut Microbiome Composition Using Two Different Bioinformatic Pipelines. BioMed Research International, 2014, 1–10. https://doi.org/10.1155/2014/325340

An Altered Gut Microbiome Profile in a Child Affected by Crohn's Disease Normalized After Nutritional Therapy

American Journal of Gastroenterology / May 01, 2013

D’Argenio, V., Precone, V., Casaburi, G., Miele, E., Martinelli, M., Staiano, A., Salvatore, F., & Sacchetti, L. (2013). An Altered Gut Microbiome Profile in a Child Affected by Crohn’s Disease Normalized After Nutritional Therapy. American Journal of Gastroenterology, 108(5), 851–852. https://doi.org/10.1038/ajg.2013.46

Early-life gut microbiome modulation reduces the abundance of antibiotic-resistant bacteria

Antimicrobial Resistance & Infection Control / Aug 14, 2019

Casaburi, G., Duar, R. M., Vance, D. P., Mitchell, R., Contreras, L., Frese, S. A., Smilowitz, J. T., & Underwood, M. A. (2019). Early-life gut microbiome modulation reduces the abundance of antibiotic-resistant bacteria. Antimicrobial Resistance & Infection Control, 8(1). https://doi.org/10.1186/s13756-019-0583-6

Bifidobacterium infantis treatment promotes weight gain in Bangladeshi infants with severe acute malnutrition

Science Translational Medicine / Apr 13, 2022

Barratt, M. J., Nuzhat, S., Ahsan, K., Frese, S. A., Arzamasov, A. A., Sarker, S. A., Islam, M. M., Palit, P., Islam, M. R., Hibberd, M. C., Nakshatri, S., Cowardin, C. A., Guruge, J. L., Byrne, A. E., Venkatesh, S., Sundaresan, V., Henrick, B., Duar, R. M., Mitchell, R. D., … Gordon, J. I. (2022). Bifidobacterium infantis treatment promotes weight gain in Bangladeshi infants with severe acute malnutrition. Science Translational Medicine, 14(640). https://doi.org/10.1126/scitranslmed.abk1107

Metagenomic insights of the infant microbiome community structure and function across multiple sites in the United States

Scientific Reports / Jan 21, 2021

Casaburi, G., Duar, R. M., Brown, H., Mitchell, R. D., Kazi, S., Chew, S., Cagney, O., Flannery, R. L., Sylvester, K. G., Frese, S. A., Henrick, B. M., & Freeman, S. L. (2021). Metagenomic insights of the infant microbiome community structure and function across multiple sites in the United States. Scientific Reports, 11(1). https://doi.org/10.1038/s41598-020-80583-9

Comparative Genome Analysis of Bifidobacterium longum subsp. infantis Strains Reveals Variation in Human Milk Oligosaccharide Utilization Genes among Commercial Probiotics

Nutrients / Oct 23, 2020

Duar, R. M., Casaburi, G., Mitchell, R. D., Scofield, L. N. C., Ortega Ramirez, C. A., Barile, D., Henrick, B. M., & Frese, S. A. (2020). Comparative Genome Analysis of Bifidobacterium longum subsp. infantis Strains Reveals Variation in Human Milk Oligosaccharide Utilization Genes among Commercial Probiotics. Nutrients, 12(11), 3247. https://doi.org/10.3390/nu12113247

Integrating the Ecosystem Services Framework to Define Dysbiosis of the Breastfed Infant Gut: The Role of B. infantis and Human Milk Oligosaccharides

Frontiers in Nutrition / Apr 14, 2020

Duar, R. M., Henrick, B. M., Casaburi, G., & Frese, S. A. (2020). Integrating the Ecosystem Services Framework to Define Dysbiosis of the Breastfed Infant Gut: The Role of B. infantis and Human Milk Oligosaccharides. Frontiers in Nutrition, 7. https://doi.org/10.3389/fnut.2020.00033

Impact of Probiotic B. infantis EVC001 Feeding in Premature Infants on the Gut Microbiome, Nosocomially Acquired Antibiotic Resistance, and Enteric Inflammation

Frontiers in Pediatrics / Feb 16, 2021

Nguyen, M., Holdbrooks, H., Mishra, P., Abrantes, M. A., Eskew, S., Garma, M., Oca, C.-G., McGuckin, C., Hein, C. B., Mitchell, R. D., Kazi, S., Chew, S., Casaburi, G., Brown, H. K., Frese, S. A., & Henrick, B. M. (2021). Impact of Probiotic B. infantis EVC001 Feeding in Premature Infants on the Gut Microbiome, Nosocomially Acquired Antibiotic Resistance, and Enteric Inflammation. Frontiers in Pediatrics, 9. https://doi.org/10.3389/fped.2021.618009

Characterization of the stromatolite microbiome from Little Darby Island, The Bahamas using predictive and whole shotgun metagenomic analysis

Environmental Microbiology / Dec 10, 2015

Casaburi, G., Duscher, A. A., Reid, R. P., & Foster, J. S. (2015). Characterization of the stromatolite microbiome from <scp>L</scp>ittle <scp>D</scp>arby <scp>I</scp>sland, <scp>T</scp>he <scp>B</scp>ahamas using predictive and whole shotgun metagenomic analysis. Environmental Microbiology, 18(5), 1452–1469. Portico. https://doi.org/10.1111/1462-2920.13094

Early probiotic supplementation with B. infantis in breastfed infants leads to persistent colonization at 1 year

Pediatric Research / Mar 24, 2021

O’Brien, C. E., Meier, A. K., Cernioglo, K., Mitchell, R. D., Casaburi, G., Frese, S. A., Henrick, B. M., Underwood, M. A., & Smilowitz, J. T. (2021). Early probiotic supplementation with B. infantis in breastfed infants leads to persistent colonization at 1 year. Pediatric Research, 91(3), 627–636. https://doi.org/10.1038/s41390-020-01350-0

Comparative Metagenomics Provides Insight Into the Ecosystem Functioning of the Shark Bay Stromatolites, Western Australia

Frontiers in Microbiology / Jun 25, 2018

Babilonia, J., Conesa, A., Casaburi, G., Pereira, C., Louyakis, A. S., Reid, R. P., & Foster, J. S. (2018). Comparative Metagenomics Provides Insight Into the Ecosystem Functioning of the Shark Bay Stromatolites, Western Australia. Frontiers in Microbiology, 9. https://doi.org/10.3389/fmicb.2018.01359

Characterization of Microbial Mat Microbiomes in the Modern Thrombolite Ecosystem of Lake Clifton, Western Australia Using Shotgun Metagenomics

Frontiers in Microbiology / Jul 06, 2016

Warden, J. G., Casaburi, G., Omelon, C. R., Bennett, P. C., Breecker, D. O., & Foster, J. S. (2016). Characterization of Microbial Mat Microbiomes in the Modern Thrombolite Ecosystem of Lake Clifton, Western Australia Using Shotgun Metagenomics. Frontiers in Microbiology, 7. https://doi.org/10.3389/fmicb.2016.01064

Reduced colonic mucin degradation in breastfed infants colonized by Bifidobacterium longum subsp. infantis EVC001

FEBS Open Bio / Sep 17, 2018

Karav, S., Casaburi, G., & Frese, S. A. (2018). Reduced colonic mucin degradation in breastfed infants colonized by Bifidobacterium longum subsp. infantis EVC001. FEBS Open Bio, 8(10), 1649–1657. Portico. https://doi.org/10.1002/2211-5463.12516

Oropharyngeal microbiome evaluation highlights Neisseria abundance in active celiac patients

Scientific Reports / Jul 23, 2018

Iaffaldano, L., Granata, I., Pagliuca, C., Esposito, M. V., Casaburi, G., Salerno, G., Colicchio, R., Piccirillo, M., Ciacci, C., Del Vecchio Blanco, G., Guarracino, M. R., Salvatore, P., Salvatore, F., D’Argenio, V., & Sacchetti, L. (2018). Oropharyngeal microbiome evaluation highlights Neisseria abundance in active celiac patients. Scientific Reports, 8(1). https://doi.org/10.1038/s41598-018-29443-1

A Study of the Microbial Spatial Heterogeneity of Bahamian Thrombolites Using Molecular, Biochemical, and Stable Isotope Analyses

Astrobiology / May 01, 2017

Louyakis, A. S., Mobberley, J. M., Vitek, B. E., Visscher, P. T., Hagan, P. D., Reid, R. P., Kozdon, R., Orland, I. J., Valley, J. W., Planavsky, N. J., Casaburi, G., & Foster, J. S. (2017). A Study of the Microbial Spatial Heterogeneity of Bahamian Thrombolites Using Molecular, Biochemical, and Stable Isotope Analyses. Astrobiology, 17(5), 413–430. https://doi.org/10.1089/ast.2016.1563

Colonization of breastfed infants by Bifidobacterium longum subsp. infantis EVC001 reduces virulence gene abundance

Human Microbiome Journal / Aug 01, 2018

Casaburi, G., & Frese, S. A. (2018). Colonization of breastfed infants by Bifidobacterium longum subsp. infantis EVC001 reduces virulence gene abundance. Human Microbiome Journal, 9, 7–10. https://doi.org/10.1016/j.humic.2018.05.001

Microbiome composition indicate dysbiosis and lower richness in tumor breast tissues compared to healthy adjacent paired tissue, within the same women

BMC Cancer / Jan 03, 2022

Esposito, M. V., Fosso, B., Nunziato, M., Casaburi, G., D’Argenio, V., Calabrese, A., D’Aiuto, M., Botti, G., Pesole, G., & Salvatore, F. (2022). Microbiome composition indicate dysbiosis and lower richness in tumor breast tissues compared to healthy adjacent paired tissue, within the same women. BMC Cancer, 22(1). https://doi.org/10.1186/s12885-021-09074-y

GenCoF: a graphical user interface to rapidly remove human genome contaminants from metagenomic datasets

Bioinformatics / Nov 26, 2018

Czajkowski, M. D., Vance, D. P., Frese, S. A., & Casaburi, G. (2018). GenCoF: a graphical user interface to rapidly remove human genome contaminants from metagenomic datasets. Bioinformatics, 35(13), 2318–2319. https://doi.org/10.1093/bioinformatics/bty963

A year in the life of a thrombolite: comparative metatranscriptomics reveals dynamic metabolic changes over diel and seasonal cycles

Environmental Microbiology / Dec 29, 2017

Louyakis, A. S., Gourlé, H., Casaburi, G., Bonjawo, R. M. E., Duscher, A. A., & Foster, J. S. (2017). A year in the life of a thrombolite: comparative metatranscriptomics reveals dynamic metabolic changes over diel and seasonal cycles. Environmental Microbiology, 20(2), 842–861. Portico. https://doi.org/10.1111/1462-2920.14029

Transcriptomic changes in an animal-bacterial symbiosis under modeled microgravity conditions

Scientific Reports / Apr 10, 2017

Casaburi, G., Goncharenko-Foster, I., Duscher, A. A., & Foster, J. S. (2017). Transcriptomic changes in an animal-bacterial symbiosis under modeled microgravity conditions. Scientific Reports, 7(1). https://doi.org/10.1038/srep46318

N-glycans from human milk glycoproteins are selectively released by an infant gut symbiont in vivo

Journal of Functional Foods / Oct 01, 2019

Karav, S., Casaburi, G., Arslan, A., Kaplan, M., Sucu, B., & Frese, S. (2019). N-glycans from human milk glycoproteins are selectively released by an infant gut symbiont in vivo. Journal of Functional Foods, 61, 103485. https://doi.org/10.1016/j.jff.2019.103485

No Change in the Mucosal Gut Microbiome is Associated With Celiac Disease-Specific Microbiome Alteration in Adult Patients

American Journal of Gastroenterology / Nov 01, 2016

D’Argenio, V., Casaburi, G., Precone, V., Pagliuca, C., Colicchio, R., Sarnataro, D., Discepolo, V., Kim, S. M., Russo, I., Del Vecchio Blanco, G., Horner, D. S., Chiara, M., Pesole, G., Salvatore, P., Monteleone, G., Ciacci, C., Caporaso, G. J., Jabrì, B., Salvatore, F., & Sacchetti, L. (2016). No Change in the Mucosal Gut Microbiome is Associated With Celiac Disease-Specific Microbiome Alteration in Adult Patients. American Journal of Gastroenterology, 111(11), 1659–1661. https://doi.org/10.1038/ajg.2016.227

Effects of plant species on stream bacterial communities via leachate from leaf litter

Hydrobiologia / Oct 07, 2017

Wymore, A. S., Salpas, E., Casaburi, G., Liu, C. M., Price, L. B., Hungate, B. A., McDowell, W. H., & Marks, J. C. (2017). Effects of plant species on stream bacterial communities via leachate from leaf litter. Hydrobiologia, 807(1), 131–144. https://doi.org/10.1007/s10750-017-3386-x

Multidisciplinary In-Depth Investigation in a Young Athlete Suffering from Syncope Caused by Myocardial Bridge

Diagnostics / Nov 19, 2021

Brancaccio, M., Mennitti, C., Cesaro, A., Monda, E., D’Argenio, V., Casaburi, G., Mazzaccara, C., Ranieri, A., Fimiani, F., Barretta, F., Uomo, F., Caiazza, M., Lioncino, M., D’Alicandro, G., Limongelli, G., Calabrò, P., Terracciano, D., Lombardo, B., Frisso, G., & Scudiero, O. (2021). Multidisciplinary In-Depth Investigation in a Young Athlete Suffering from Syncope Caused by Myocardial Bridge. Diagnostics, 11(11), 2144. https://doi.org/10.3390/diagnostics11112144

The Cause of Death of a Child in the 18th Century Solved by Bone Microbiome Typing Using Laser Microdissection and Next Generation Sequencing

International Journal of Molecular Sciences / Jan 06, 2017

D’Argenio, V., Torino, M., Precone, V., Casaburi, G., Esposito, M., Iaffaldano, L., Malapelle, U., Troncone, G., Coto, I., Cavalcanti, P., De Rosa, G., Salvatore, F., & Sacchetti, L. (2017). The Cause of Death of a Child in the 18th Century Solved by Bone Microbiome Typing Using Laser Microdissection and Next Generation Sequencing. International Journal of Molecular Sciences, 18(1), 109. https://doi.org/10.3390/ijms18010109

Metabolic model of necrotizing enterocolitis in the premature newborn gut resulting from enteric dysbiosis

Frontiers in Pediatrics / Aug 23, 2022

Casaburi, G., Wei, J., Kazi, S., Liu, J., Wang, K., Tao, G.-Z., Lin, P.-Y., Dunn, J. C. Y., Henrick, B. M., Frese, S. A., & Sylvester, K. G. (2022). Metabolic model of necrotizing enterocolitis in the premature newborn gut resulting from enteric dysbiosis. Frontiers in Pediatrics, 10. https://doi.org/10.3389/fped.2022.893059

Genomic evidence of the illumination response mechanism and evolutionary history of magnetotactic bacteria within the Rhodospirillaceae family

BMC Genomics / May 22, 2019

Wang, Y., Casaburi, G., Lin, W., Li, Y., Wang, F., & Pan, Y. (2019). Genomic evidence of the illumination response mechanism and evolutionary history of magnetotactic bacteria within the Rhodospirillaceae family. BMC Genomics, 20(1). https://doi.org/10.1186/s12864-019-5751-9

Digital Proxy of a Bio-Reactor (DIYBOT) combines sensor data and data analytics to improve greywater treatment and wastewater management systems

Scientific Reports / May 15, 2020

McLamore, E. S., Huffaker, R., Shupler, M., Ward, K., Datta, S. P. A., Katherine Banks, M., Casaburi, G., Babilonia, J., & Foster, J. S. (2020). Digital Proxy of a Bio-Reactor (DIYBOT) combines sensor data and data analytics to improve greywater treatment and wastewater management systems. Scientific Reports, 10(1). https://doi.org/10.1038/s41598-020-64789-5

D47. INTERSTITIAL LUNG DISEASE: COLLAGEN-VASCULAR DISEASE, SARCOIDOSIS AND OTHER DIFFUSE LUNG DISEASES

May 01, 2010

D47. INTERSTITIAL LUNG DISEASE: COLLAGEN-VASCULAR DISEASE, SARCOIDOSIS AND OTHER DIFFUSE LUNG DISEASES. (2010, May). https://doi.org/10.1164/ajrccm-conference.2010.d047

Restoring Bifidobacterium Infantis EVC001 to the Infant Gut Microbiome Significantly Reduces Intestinal Inflammation (OR12-01-19)

Current Developments in Nutrition / Jun 01, 2019

Henrick, B., Chew, S., Mitchell, R., Contreras, L., Casaburi, G., Frese, S., Smilowitz, J., & Underwood, M. (2019). Restoring Bifidobacterium Infantis EVC001 to the Infant Gut Microbiome Significantly Reduces Intestinal Inflammation (OR12-01-19). Current Developments in Nutrition, 3, nzz049.OR12-01-19. https://doi.org/10.1093/cdn/nzz049.or12-01-19

Gut Barrier Function Is Improved in Infants Colonized by Bifidobacterium Longum Subsp. Infantis EVC001 (FS04-05-19)

Current Developments in Nutrition / Jun 01, 2019

Casaburi, G., Karav, S., Frese, S., & Henrick, B. (2019). Gut Barrier Function Is Improved in Infants Colonized by Bifidobacterium Longum Subsp. Infantis EVC001 (FS04-05-19). Current Developments in Nutrition, 3, nzz048.FS04-05-19. https://doi.org/10.1093/cdn/nzz048.fs04-05-19

Supplementation With Activated Bifidobacterium longum Subspecies infantis Reduces Antibiotic Resistance Gene Carriage in Breastfed Infants

Journal of Obstetric, Gynecologic & Neonatal Nursing / Jun 01, 2018

Casaburi, G. (2018). Supplementation With Activated Bifidobacterium longum Subspecies infantis Reduces Antibiotic Resistance Gene Carriage in Breastfed Infants. Journal of Obstetric, Gynecologic &amp; Neonatal Nursing, 47(3), S55. https://doi.org/10.1016/j.jogn.2018.04.109

Preterm infants fed B. infantis EVC001 Demonstrate Significant Reduction in Intestinal Inflammation via Modulation of Gut Microbiome Composition

Pediatrics / Mar 01, 2021

Nguyen, M., Holdbrooks, H., Abrantes, M., Mishra, P. K., McGuckin, C., Hein, C. T., Chew, S., Brown, H. K., Casaburi, G., Kazi, S., Frese, S., & Henrick, B. M. (2021). Preterm infants fed B. infantis EVC001 Demonstrate Significant Reduction in Intestinal Inflammation via Modulation of Gut Microbiome Composition. Pediatrics, 147(3_MeetingAbstract), 722–723. https://doi.org/10.1542/peds.147.3ma7.722

Author Correction: Metagenomic insights of the infant microbiome community structure and function across multiple sites in the United States

Scientific Reports / May 20, 2021

Casaburi, G., Duar, R. M., Brown, H., Mitchell, R. D., Kazi, S., Chew, S., Cagney, O., Flannery, R. L., Sylvester, K. G., Frese, S. A., Henrick, B. M., & Freeman, S. L. (2021). Author Correction: Metagenomic insights of the infant microbiome community structure and function across multiple sites in the United States. Scientific Reports, 11(1). https://doi.org/10.1038/s41598-021-90391-4

Artificial intelligence accurately predicts necrotizing enterocolitis from the healthy preterm infant gut microbiome.

Pediatrics / Aug 01, 2019

Vance, D., Frese, S. Alex., & Casaburi, G. (2019). Artificial intelligence accurately predicts necrotizing enterocolitis from the healthy preterm infant gut microbiome. Pediatrics, 144(2_MeetingAbstract), 697–697. https://doi.org/10.1542/peds.144.2ma7.697

Metagenomic analysis reveals reduction in antibiotic resistance gene carriage in breastfed infants supplemented with activated Bifidobacterium longum subsp. infantis.

Pediatrics / May 01, 2018

Casaburi, G., Frese, S., Hutton, A., Shaw, C., Smilowitz, J., & Underwood, M. A. (2018). Metagenomic analysis reveals reduction in antibiotic resistance gene carriage in breastfed infants supplemented with activated Bifidobacterium longum subsp. infantis. Pediatrics, 142(1_MeetingAbstract), 165–165. https://doi.org/10.1542/peds.142.1ma2.165

Meta-analysis of Multi-functional Biomarkers for Discovery and Predictive Modeling of Colorectal Adenoma and Carcinoma

Apr 25, 2023

Peterson, S. N., Eroshkin, A. M., Kozbial, P. Z., Florio, E., Fouladi, F., Strom, N., Valdes, Y., Kuehn, G., Casaburi, G., & Kuehn, T. (2023). Meta-analysis of Multi-functional Biomarkers for Discovery and Predictive Modeling of Colorectal Adenoma and Carcinoma. https://doi.org/10.21203/rs.3.rs-2838129/v1

Metagenomic Analysis of The Gut Microbiome of Term Infants In The United States Reveals Widespread Dysbiosis

Section on Neonatal-Perinatal Medicine Program / Feb 24, 2021

Casaburi, G., Duar, R., Brown, H. K., Mitchell, R., Kazi, S., Chew, S., Cagney, O., Flannery, R., Frese, S. A., Henrick, B. M., & Freeman, S. (2021, February 24). Metagenomic Analysis of The Gut Microbiome of Term Infants In The United States Reveals Widespread Dysbiosis. Section on Neonatal-Perinatal Medicine Program. https://doi.org/10.1542/peds.147.3_meetingabstract.715

Metagenomic Analysis of The Gut Microbiome of Term Infants In The United States Reveals Widespread Dysbiosis

Pediatrics / Mar 01, 2021

Casaburi, G., Duar, R., Brown, H. K., Mitchell, R., Kazi, S., Chew, S., Cagney, O., Flannery, R., Frese, S. A., Henrick, B. M., & Freeman, S. (2021). Metagenomic Analysis of The Gut Microbiome of Term Infants In The United States Reveals Widespread Dysbiosis. Pediatrics, 147(3_MeetingAbstract), 715–715. https://doi.org/10.1542/peds.147.3ma7.715a

A Microbiome-Based Solution to Address Alarming Levels of Drug-Resistant Bacteria in the Newborn Infant Gut

Infection Control & Hospital Epidemiology / Oct 01, 2020

Casaburi, G., Duar, R., Henrick, B., & Frese, S. (2020). A Microbiome-Based Solution to Address Alarming Levels of Drug-Resistant Bacteria in the Newborn Infant Gut. Infection Control &amp; Hospital Epidemiology, 41(S1), s439–s439. https://doi.org/10.1017/ice.2020.1106

Artificial intelligence reveals biomarkers of necrotizing enterocolitis in the preterm infant gut microbiome

Pediatrics / Jul 01, 2020

Casaburi, G., Kazi, S., Ling, B., Sylvester, karl, & Frese, S. A. (2020). Artificial intelligence reveals biomarkers of necrotizing enterocolitis in the preterm infant gut microbiome. Pediatrics, 146(1_MeetingAbstract), 370–370. https://doi.org/10.1542/peds.146.1ma4.370a

Colonization of B. infantis EVC001 Modulates Enteric Inflammation in exclusively breastfed infants

Pediatrics / Jul 01, 2020

Henrick, B. M., Chew, S., Casaburi, G., Brown, H., Frese, S. A., Zhou, Y., Underwood, M., & Smilowitz, J. T. (2020). Colonization of B. infantis EVC001 Modulates Enteric Inflammation in exclusively breastfed infants. Pediatrics, 146(1_MeetingAbstract), 373–374. https://doi.org/10.1542/peds.146.1ma4.373

Key genes involved in utilization of highly abundant HMO in breastmilk are present in B. infantis EVC001 allowing for superior colonization of the breastfed infant gut compared to other commercial probiotic strains

Pediatrics / Jul 01, 2020

Duar, R. M., Casaburi, G., Contreras, L., Mitchell, R., Ramirez, C. O., & Frese, S. A. (2020). Key genes involved in utilization of highly abundant HMO in breastmilk are present in B. infantis EVC001 allowing for superior colonization of the breastfed infant gut compared to other commercial probiotic strains. Pediatrics, 146(1_MeetingAbstract), 129–129. https://doi.org/10.1542/peds.146.1ma2.129a

N-glycans from human milk glycoproteins are selectively released by B. infantis EVC001 in vivo.

Pediatrics / Jul 01, 2020

Frese, S. A., Karav, S., Casaburi, G., Arsalan, A., Kaplan, M., & Sucu, B. (2020). N-glycans from human milk glycoproteins are selectively released by B. infantis EVC001 in vivo. Pediatrics, 146(1_MeetingAbstract), 140–140. https://doi.org/10.1542/peds.146.1ma2.140a

Metagenomic analysis reveals reduction in antibiotic resistance genes in breastfed infants fed Bifidobacterium longum subsp. infantis EVC001

Pediatrics / Aug 01, 2019

Casaburi, G., Smilowitz, J., Underwood, M., Vance, D., Duar, R., Contreras, L., & Frese, S. Alex. (2019). Metagenomic analysis reveals reduction in antibiotic resistance genes in breastfed infants fed Bifidobacterium longum subsp. infantis EVC001. Pediatrics, 144(2_MeetingAbstract), 659–659. https://doi.org/10.1542/peds.144.2ma7.659

Maximizing Nutrient Availability for the Breastfed Infant Through Colonization with B. Infantis EVC001 (FS04-04-19)

Current Developments in Nutrition / Jun 01, 2019

Shafizadeh, T., Frese, S., & Casaburi, G. (2019). Maximizing Nutrient Availability for the Breastfed Infant Through Colonization with B. Infantis EVC001 (FS04-04-19). Current Developments in Nutrition, 3, nzz048.FS04-04-19. https://doi.org/10.1093/cdn/nzz048.fs04-04-19

P.09.7: Mucosal GUT Microbiota Composition in Patients with HCV Infection, from Chronic Hepatitis to Hepatocellular Carcinoma

Digestive and Liver Disease / Mar 01, 2017

Sanduzzi Zamparelli, M., D’Argenio, V., Casaburi, G., Precone, V., Esposito, M. V., Lovero, D., Postiglione, I., Fosso, B., Compare, D., Coccoli, P., Rocco, A., Saviano, S., Pesole, G., Di Costanzo, G. G., Salvatore, F., & Nardone, G. (2017). P.09.7: Mucosal GUT Microbiota Composition in Patients with HCV Infection, from Chronic Hepatitis to Hepatocellular Carcinoma. Digestive and Liver Disease, 49, e190. https://doi.org/10.1016/s1590-8658(17)30549-2

Nitti, Paolo (2017). La grammatica nell’insegnamento dell’italiano per stranieri. Metodi e modelli per l’acquisizione della grammatica. Saarbrücken: Edizioni Accademiche Italiane, 210 pp.

7 | 3 | 2018 / Jun 07, 2019

Ballarin, E. (2019). Nitti, Paolo (2017). La grammatica nell’insegnamento dell’italiano per stranieri. Metodi e modelli per l’acquisizione della grammatica. Saarbrücken: Edizioni Accademiche Italiane, 210 pp. EL.LE, 3. https://doi.org/10.30687/elle/2280-6792/2018/03/010

Expression pattern of two paralogs of the PI/GLO-like locus during Orchis italica (Orchidaceae, Orchidinae) flower development

Development Genes and Evolution / Sep 04, 2011

Salemme, M., Sica, M., Gaudio, L., & Aceto, S. (2011). Expression pattern of two paralogs of the PI/GLO-like locus during Orchis italica (Orchidaceae, Orchidinae) flower development. Development Genes and Evolution, 221(4), 241–246. https://doi.org/10.1007/s00427-011-0372-6

Bifidobacterium longum Subspecies infantis Strain EVC001 Decreases Neonatal Murine Necrotizing Enterocolitis

Nutrients / Jan 24, 2022

Lueschow, S. R., Boly, T. J., Frese, S. A., Casaburi, G., Mitchell, R. D., Henrick, B. M., & McElroy, S. J. (2022). Bifidobacterium longum Subspecies infantis Strain EVC001 Decreases Neonatal Murine Necrotizing Enterocolitis. Nutrients, 14(3), 495. https://doi.org/10.3390/nu14030495

Colonization Resistance in the Infant Gut: The Role of B. infantis in Reducing pH and Preventing Pathogen Growth

High-Throughput / Mar 27, 2020

Duar, R. M., Kyle, D., & Casaburi, G. (2020). Colonization Resistance in the Infant Gut: The Role of B. infantis in Reducing pH and Preventing Pathogen Growth. High-Throughput, 9(2), 7. https://doi.org/10.3390/ht9020007

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