Work with Giorgio Casaburi, Ph.D. | NotedSource
Associate Vice President, Bioinformatics & Data
Analytics
https://cv.notedsource.io/me/25LNWGOL
Giorgio Casaburi, Ph.D.
Associate Vice President, Bioinformatics & Data Analytics
Research Expertise
NGS
Bioinformatics
Metaomics
Machine Learning
Precision Medicine
Microbiology
Molecular Biology
Hepatology
Gastroenterology
Pediatrics, Perinatology and Child Health
Infectious Diseases
Public Health, Environmental and Occupational Health
Pharmacology (medical)
Microbiology (medical)
Biotechnology
Biomedical Engineering
Biochemistry
Bioengineering
Nutrition and Dietetics
Food Science
Endocrinology, Diabetes and Metabolism
Ecology, Evolution, Behavior and Systematics
Space and Planetary Science
Genetics
Cancer Research
Oncology
Computational Mathematics
Statistics and Probability
Computer Science Applications
Computational Theory and Mathematics
Aquatic Science
Clinical Biochemistry
Catalysis
Organic Chemistry
Spectroscopy
Inorganic Chemistry
Physical and Theoretical Chemistry
Pediatrics
Critical Care Nursing
Maternity and Midwifery
Epidemiology
Developmental Biology
Legacy Map
Full ViewPublications
Persistence of Supplemented
Bifidobacterium longum subsp.
infantis
EVC001 in Breastfed Infants
mSphere
2017
Metagenomics Reveals Dysbiosis and a
Potentially Pathogenic N. flavescens
Strain in Duodenum of Adult Celiac
Patients
American Journal of
Gastroenterology
2016
New multi-scale perspectives on the
stromatolites of Shark Bay, Western
Australia
Scientific Reports
2016
Symbiotic organs shaped by distinct modes
of genome evolution in cephalopods
Proceedings of the National Academy of
Sciences
2019
Elevated Fecal pH Indicates a Profound
Change in the Breastfed Infant Gut
Microbiome Due to Reduction of
Bifidobacterium
over the Past Century
mSphere
2018
Colonization by B. infantis EVC001
modulates enteric inflammation in
exclusively breastfed infants
Pediatric Research
2019
The Personal Human Oral Microbiome
Obscures the Effects of Treatment on
Periodontal Disease
PLoS ONE
2014
Comparative Metagenomic Analysis of Human
Gut Microbiome Composition Using Two
Different Bioinformatic Pipelines
BioMed Research International
2014
An Altered Gut Microbiome Profile in a
Child Affected by Crohn's Disease
Normalized After Nutritional Therapy
American Journal of
Gastroenterology
2013
Early-life gut microbiome modulation
reduces the abundance of
antibiotic-resistant bacteria
Antimicrobial Resistance &
Infection Control
2019
Bifidobacterium infantis treatment
promotes weight gain in Bangladeshi
infants with severe acute malnutrition
Science Translational Medicine
2022
Metagenomic insights of the infant
microbiome community structure and
function across multiple sites in the
United States
Scientific Reports
2021
Comparative Genome Analysis of
Bifidobacterium longum subsp. infantis
Strains Reveals Variation in Human Milk
Oligosaccharide Utilization Genes among
Commercial Probiotics
Nutrients
2020
Integrating the Ecosystem Services
Framework to Define Dysbiosis of the
Breastfed Infant Gut: The Role of B.
infantis and Human Milk Oligosaccharides
Frontiers in Nutrition
2020
Impact of Probiotic B. infantis EVC001
Feeding in Premature Infants on the Gut
Microbiome, Nosocomially Acquired
Antibiotic Resistance, and Enteric
Inflammation
Frontiers in Pediatrics
2021
Characterization of the stromatolite
microbiome from L ittle
D arby I sland,
T he B ahamas using
predictive and whole shotgun metagenomic
analysis
Environmental Microbiology
2015
Early probiotic supplementation with B.
infantis in breastfed infants leads to
persistent colonization at 1 year
Pediatric Research
2021
Comparative Metagenomics Provides Insight
Into the Ecosystem Functioning of the
Shark Bay Stromatolites, Western Australia
Frontiers in Microbiology
2018
Characterization of Microbial Mat
Microbiomes in the Modern Thrombolite
Ecosystem of Lake Clifton, Western
Australia Using Shotgun Metagenomics
Frontiers in Microbiology
2016
Reduced colonic mucin degradation in
breastfed infants colonized by
Bifidobacterium longum subsp. infantis
EVC001
FEBS Open Bio
2018
Oropharyngeal microbiome evaluation
highlights Neisseria abundance in active
celiac patients
Scientific Reports
2018
A Study of the Microbial Spatial
Heterogeneity of Bahamian Thrombolites
Using Molecular, Biochemical, and Stable
Isotope Analyses
Astrobiology
2017
Colonization of breastfed infants by
Bifidobacterium longum subsp. infantis
EVC001 reduces virulence gene abundance
Human Microbiome Journal
2018
Microbiome composition indicate dysbiosis
and lower richness in tumor breast tissues
compared to healthy adjacent paired
tissue, within the same women
BMC Cancer
2022
GenCoF: a graphical user interface to
rapidly remove human genome contaminants
from metagenomic datasets
Bioinformatics
2018
A year in the life of a thrombolite:
comparative metatranscriptomics reveals
dynamic metabolic changes over diel and
seasonal cycles
Environmental Microbiology
2017
Transcriptomic changes in an
animal-bacterial symbiosis under modeled
microgravity conditions
Scientific Reports
2017
N-glycans from human milk glycoproteins
are selectively released by an infant gut
symbiont in vivo
Journal of Functional Foods
2019
No Change in the Mucosal Gut Microbiome is
Associated With Celiac Disease-Specific
Microbiome Alteration in Adult Patients
American Journal of
Gastroenterology
2016
Effects of plant species on stream
bacterial communities via leachate from
leaf litter
Hydrobiologia
2017
Multidisciplinary In-Depth Investigation
in a Young Athlete Suffering from Syncope
Caused by Myocardial Bridge
Diagnostics
2021
The Cause of Death of a Child in the 18th
Century Solved by Bone Microbiome Typing
Using Laser Microdissection and Next
Generation Sequencing
International Journal of Molecular
Sciences
2017
Metabolic model of necrotizing
enterocolitis in the premature newborn gut
resulting from enteric dysbiosis
Frontiers in Pediatrics
2022
Genomic evidence of the illumination
response mechanism and evolutionary
history of magnetotactic bacteria within
the Rhodospirillaceae family
BMC Genomics
2019
Digital Proxy of a Bio-Reactor (DIYBOT)
combines sensor data and data analytics to
improve greywater treatment and wastewater
management systems
Scientific Reports
2020
D47. INTERSTITIAL LUNG DISEASE:
COLLAGEN-VASCULAR DISEASE, SARCOIDOSIS AND
OTHER DIFFUSE LUNG DISEASES
Unknown Venue
2010
Restoring Bifidobacterium Infantis EVC001
to the Infant Gut Microbiome Significantly
Reduces Intestinal Inflammation
(OR12-01-19)
Current Developments in Nutrition
2019
Gut Barrier Function Is Improved in
Infants Colonized by Bifidobacterium
Longum Subsp. Infantis EVC001 (FS04-05-19)
Current Developments in Nutrition
2019
Supplementation With Activated
Bifidobacterium longum Subspecies infantis
Reduces Antibiotic Resistance Gene
Carriage in Breastfed Infants
Journal of Obstetric, Gynecologic &
Neonatal Nursing
2018
Preterm infants fed B. infantis EVC001
Demonstrate Significant Reduction in
Intestinal Inflammation via Modulation of
Gut Microbiome Composition
Pediatrics
2021
Author Correction: Metagenomic insights of
the infant microbiome community structure
and function across multiple sites in the
United States
Scientific Reports
2021
Artificial intelligence accurately
predicts necrotizing enterocolitis from
the healthy preterm infant gut microbiome.
Pediatrics
2019
Metagenomic analysis reveals reduction in
antibiotic resistance gene carriage in
breastfed infants supplemented with
activated Bifidobacterium longum subsp.
infantis.
Pediatrics
2018
Meta-analysis of Multi-functional
Biomarkers for Discovery and Predictive
Modeling of Colorectal Adenoma and
Carcinoma
Unknown Venue
2023
Metagenomic Analysis of The Gut Microbiome
of Term Infants In The United States
Reveals Widespread Dysbiosis
Section on Neonatal-Perinatal Medicine
Program
2021
Metagenomic Analysis of The Gut Microbiome
of Term Infants In The United States
Reveals Widespread Dysbiosis
Pediatrics
2021
A Microbiome-Based Solution to Address
Alarming Levels of Drug-Resistant Bacteria
in the Newborn Infant Gut
Infection Control & Hospital
Epidemiology
2020
Artificial intelligence reveals biomarkers
of necrotizing enterocolitis in the
preterm infant gut microbiome
Pediatrics
2020
Colonization of B. infantis EVC001
Modulates Enteric Inflammation in
exclusively breastfed infants
Pediatrics
2020
Key genes involved in utilization of
highly abundant HMO in breastmilk are
present in B. infantis EVC001 allowing for
superior colonization of the breastfed
infant gut compared to other commercial
probiotic strains
Pediatrics
2020
N-glycans from human milk glycoproteins
are selectively released by B. infantis
EVC001 in vivo.
Pediatrics
2020
Metagenomic analysis reveals reduction in
antibiotic resistance genes in breastfed
infants fed Bifidobacterium longum subsp.
infantis EVC001
Pediatrics
2019
Maximizing Nutrient Availability for the
Breastfed Infant Through Colonization with
B. Infantis EVC001 (FS04-04-19)
Current Developments in Nutrition
2019
P.09.7: Mucosal GUT Microbiota Composition
in Patients with HCV Infection, from
Chronic Hepatitis to Hepatocellular
Carcinoma
Digestive and Liver Disease
2017
Nitti, Paolo (2017).
La grammatica nell’insegnamento
dell’italiano per stranieri. Metodi e
modelli per l’acquisizione della
grammatica. Saarbrücken: Edizioni Accademiche
Italiane, 210 pp.
7 | 3 | 2018
2019
Expression pattern of two paralogs of the
PI/GLO-like locus during Orchis italica
(Orchidaceae, Orchidinae) flower
development
Development Genes and Evolution
2011
Bifidobacterium longum Subspecies infantis
Strain EVC001 Decreases Neonatal Murine
Necrotizing Enterocolitis
Nutrients
2022
Colonization Resistance in the Infant Gut:
The Role of B. infantis in Reducing pH and
Preventing Pathogen Growth
High-Throughput
2020
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