Olga (Olia) Gaidarenko, Ph. D.
Synthetic biologist with a decade of strain engineering experience and a passion for sustainability.
Research Expertise
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Education
UC San Diego
Ph. D., Biology/Scripps Institution of Oceanography: Marine Biology Research Division (Joint work)
UC San Diego
B. S. , Molecular Biology
Experience
Living Carbon
Research Scientist/Synthetic Biologist / October, 2022 — October, 2023
Started a new microalgal metabolic engineering project from scratch, working with non-model species. Established a platform for microalgal cultivation. Developed genetic manipulation tools, novel transformation methods, algal bioprospecting assays. Designed and carried out complex cloning strategies including Golden Gate, Gateway, seamless, and restriction enzyme-based cloning. Mapped RNA-seq data to reference genome, built gene models.
HHMI/UC Berkeley
Postdoctoral Associate / January, 2019 — October, 2022
Identified genes involved in cell wall biosynthesis of the emerging model microalga Nannochloropsis oceanica. Used homology searches to identify candidates, RNA-seq to build gene models, and CRISPR-Cas9 to generate gene knockout lines. Identified N. oceanica insertional mutagenesis loci using NGS resequencing data analysis. Developed a high throughput mutant screen for carotenoid biosynthesis defects in N. oceanica. Developed a mutant screen for defects in stomatal responses to light intensity changes in the plant Arabidopsis thaliana and identified several candidate genes for the signaling pathway. Demonstrated that a predominant hypothesis about the stomatal light response signaling pathway appears to be incorrect by using physiological (Li-Cor) measurements of wild-type and mutant A. thaliana.
Outlier
Freelance Consultant/Contributor (Training AI) / March, 2024 — Present
Using expertise in biology to train AI models. Creating challenging prompts and evaluating AI model responses. Evaluating the prompts created by others and providing feedback and suggestions for improvement.
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