Sumeet K. Tiwari

Bioinformatic researcher at Quadram Institute Bioscience

Research Expertise

Bioinformatics
Microbiology (medical)
Microbiology
Virology
Infectious Diseases
Pharmacology (medical)
Pharmacology
Ecology
Applied Microbiology and Biotechnology
Food Science
Biotechnology
Cell Biology
Developmental Biology
Plant Science
Physiology
Ecology, Evolution, Behavior and Systematics
Structural Biology

About

I'm an experienced bioinformatician with experience in analysing OMIC data (Meta-Genomics, RNASeq and Genomics).

Legacy Map

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Publications

Risk of Transmission of Antimicrobial Resistant Escherichia coli from Commercial Broiler and Free-Range Retail Chicken in India
Frontiers in Microbiology
2017
Comparative Genomic Analysis of Globally Dominant ST131 Clone with Other Epidemiologically Successful Extraintestinal Pathogenic Escherichia coli (ExPEC) Lineages
mBio
2017
Molecular Epidemiology and Genome Dynamics of New Delhi Metallo-β-Lactamase-Producing Extraintestinal Pathogenic Escherichia coli Strains from India
Antimicrobial Agents and Chemotherapy
2016
Comparative Genomics of Escherichia coli Isolated from Skin and Soft Tissue and Other Extraintestinal Infections
mBio
2017
Genomic Diversity and Virulence Potential of ESBL- and AmpC-β-Lactamase-Producing Escherichia coli Strains From Healthy Food Animals Across Europe
Frontiers in Microbiology
2021
Genome Dynamics and Molecular Infection Epidemiology of Multidrug-Resistant Helicobacter pullorum Isolates Obtained from Broiler and Free-Range Chickens in India
Applied and Environmental Microbiology
2017
Contig-Layout-Authenticator (CLA): A Combinatorial Approach to Ordering and Scaffolding of Bacterial Contigs for Comparative Genomics and Molecular Epidemiology
PLOS ONE
2016
Genome-wide association reveals host-specific genomic traits in Escherichia coli
BMC Biology
2023
Using Unique ORFan Genes as Strain-specific Identifiers for Escherichia Coli
Unknown Venue
2021
Comprehensive profiling of the human intestinal DNA virome and prediction of disease-associated bacterial hosts in severe Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS)
Unknown Venue
2023
Investigating antibody reactivity to the intestinal microbiome in severe myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS)
Unknown Venue
2023
Identification of SNP Targeted Pathways From Genome-wide Association Study (GWAS) Data
Unknown Venue
2019
A hybrid and poly-polish workflow for the complete and accurate assembly of phage genomes: a case study of ten przondoviruses
Microbial Genomics
2023
A hybrid and poly-polish workflow for the complete and accurate assembly of phage genomes: a case study of ten przondoviruses
Unknown Venue
2023
Using unique ORFan genes as strain-specific identifiers for Escherichia coli
BMC Microbiology
2022
Genome-wide association reveals host-specific genomic traits in Escherichia coli
Unknown Venue
2022

Education

University of Hyderabad

M.Tech in Bioinformatics, Biotechnology and Bioinformatics

Hyderabad

JNTUA College of Engineering - Pulivendula

B.Tech in Biotechnology, Department of Biotechnology

Pulivendula

Freie Universität Berlin

Ph. D, Natural Sciences (Bioinformatician) / November, 2021

Berlin

Experience

Quadram Institute Bioscience

Bioinformatic researcher / July, 2021Present

Robert Koch Institute

Doctoral Student / June, 2017June, 2021

University of Hyderabad

Project Junior Research fellow / August, 2015May, 2017

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