My research is spread over the following fundamental and applied areas: application of meta-omics to better understand microbially-mediated environmental functions, such as bioremediation and biofuel production; host-microbiome associations in health and disease, using oysters and the human gut ecosystem as model systems; and nanotechnology for environmental sensing and remediation. I have also been involved in several entrepreneurial ventures that aim to commercialize the products of my research. I have multiple patents, publications, certifications, and awards in my field of expertise.
Dr. Ashvini Chauhan
Professor of Environmental Biotechnology, Florida A&M University
Research Expertise
About
Publications
Kinetics of Biodegradation of p-Nitrophenol by Different Bacteria
Biochemical and Biophysical Research Communications / Aug 01, 2000
Bhushan, B., Chauhan, A., Samanta, S. K., & Jain, R. K. (2000). Kinetics of Biodegradation of p-Nitrophenol by Different Bacteria. Biochemical and Biophysical Research Communications, 274(3), 626–630. https://doi.org/10.1006/bbrc.2000.3193
Chemotaxis of a Ralstonia sp. SJ98 toward Different Nitroaromatic Compounds and Their Degradation
Biochemical and Biophysical Research Communications / Mar 01, 2000
Samanta, S. K., Bhushan, B., Chauhan, A., & Jain, R. K. (2000). Chemotaxis of a Ralstonia sp. SJ98 toward Different Nitroaromatic Compounds and Their Degradation. Biochemical and Biophysical Research Communications, 269(1), 117–123. https://doi.org/10.1006/bbrc.2000.2204
Plasmid-Encoded Degradation of p-Nitrophenol and 4-Nitrocatechol by Arthrobacter protophormiae
Biochemical and Biophysical Research Communications / Apr 01, 2000
Chauhan, A., Chakraborti, A. K., & Jain, R. K. (2000). Plasmid-Encoded Degradation of p-Nitrophenol and 4-Nitrocatechol by Arthrobacter protophormiae. Biochemical and Biophysical Research Communications, 270(3), 733–740. https://doi.org/10.1006/bbrc.2000.2500
Plasmid-Encoded Degradation ofp-Nitrophenol byPseudomonas cepacia
Biochemical and Biophysical Research Communications / Jul 01, 1996
Prakash, D., Chauhan, A., & Jain, R. K. (1996). Plasmid-Encoded Degradation ofp-Nitrophenol byPseudomonas cepacia. Biochemical and Biophysical Research Communications, 224(2), 375–381. https://doi.org/10.1006/bbrc.1996.1036
Bacterial Quorum Sensing: Functional Features and Potential Applications in Biotechnology
Microbial Physiology / Jan 01, 2012
Mangwani, N., Dash, H. R., Chauhan, A., & Das, S. (2012). Bacterial Quorum Sensing: Functional Features and Potential Applications in Biotechnology. Microbial Physiology, 22(4), 215–227. Portico. https://doi.org/10.1159/000341847
Chemotaxis and Biodegradation of 3-Methyl- 4-Nitrophenol by Ralstonia sp. SJ98
Biochemical and Biophysical Research Communications / Aug 01, 2000
Bhushan, B., Samanta, S. K., Chauhan, A., Chakraborti, A. K., & Jain, R. K. (2000). Chemotaxis and Biodegradation of 3-Methyl- 4-Nitrophenol by Ralstonia sp. SJ98. Biochemical and Biophysical Research Communications, 275(1), 129–133. https://doi.org/10.1006/bbrc.2000.3216
Soil Functional Diversity Analysis of a Bauxite-Mined Restoration Chronosequence
Microbial Ecology / Dec 18, 2009
Lewis, D. E., White, J. R., Wafula, D., Athar, R., Dickerson, T., Williams, H. N., & Chauhan, A. (2009). Soil Functional Diversity Analysis of a Bauxite-Mined Restoration Chronosequence. Microbial Ecology, 59(4), 710–723. https://doi.org/10.1007/s00248-009-9621-x
Impact of sideways and bottom-up control factors on bacterial community succession over a tidal cycle
Proceedings of the National Academy of Sciences / Mar 17, 2009
Chauhan, A., Cherrier, J., & Williams, H. N. (2009). Impact of sideways and bottom-up control factors on bacterial community succession over a tidal cycle. Proceedings of the National Academy of Sciences, 106(11), 4301–4306. https://doi.org/10.1073/pnas.0809671106
Syntrophic-Methanogenic Associations along a Nutrient Gradient in the Florida Everglades
Applied and Environmental Microbiology / Jun 01, 2004
Chauhan, A., Ogram, A., & Reddy, K. R. (2004). Syntrophic-Methanogenic Associations along a Nutrient Gradient in the Florida Everglades. Applied and Environmental Microbiology, 70(6), 3475–3484. https://doi.org/10.1128/aem.70.6.3475-3484.2004
Global survey of diversity among environmental saltwater Bacteriovoracaceae
Environmental Microbiology / Jun 15, 2007
Pineiro, S. A., Stine, O. C., Chauhan, A., Steyert, S. R., Smith, R., & Williams, H. N. (2007). Global survey of diversity among environmental saltwater Bacteriovoracaceae. Environmental Microbiology, 9(10), 2441–2450. Portico. https://doi.org/10.1111/j.1462-2920.2007.01362.x
Halobacteriovorax, an underestimated predator on bacteria: potential impact relative to viruses on bacterial mortality
The ISME Journal / Aug 07, 2015
Williams, H. N., Lymperopoulou, D. S., Athar, R., Chauhan, A., Dickerson, T. L., Chen, H., Laws, E., Berhane, T.-K., Flowers, A. R., Bradley, N., Young, S., Blackwood, D., Murray, J., Mustapha, O., Blackwell, C., Tung, Y., & Noble, R. T. (2015). Halobacteriovorax, an underestimated predator on bacteria: potential impact relative to viruses on bacterial mortality. The ISME Journal, 10(2), 491–499. https://doi.org/10.1038/ismej.2015.129
Methods of Soil Microbial Community Analysis
Manual of Environmental Microbiology / May 14, 2007
Ogram, A., Castro, H., & Chauhan, A. (2007, May 14). Methods of Soil Microbial Community Analysis. Manual of Environmental Microbiology; Wiley; Portico. https://doi.org/10.1128/9781555815882.ch53
Degradation of 4-nitrocatechol by Burkholderia cepacia: a plasmid-encoded novel pathway
Journal of Applied Microbiology / May 01, 2000
Chauhan, A., Samanta, S. K., & Jain, R. K. (2000). Degradation of 4-nitrocatechol by Burkholderia cepacia: a plasmid-encoded novel pathway. Journal of Applied Microbiology, 88(5), 764–772. https://doi.org/10.1046/j.1365-2672.2000.01018.x
Phylogeny of Acetate-Utilizing Microorganisms in Soils along a Nutrient Gradient in the Florida Everglades
Applied and Environmental Microbiology / Oct 01, 2006
Chauhan, A., & Ogram, A. (2006). Phylogeny of Acetate-Utilizing Microorganisms in Soils along a Nutrient Gradient in the Florida Everglades. Applied and Environmental Microbiology, 72(10), 6837–6840. https://doi.org/10.1128/aem.01030-06
Fatty Acid-Oxidizing Consortia along a Nutrient Gradient in the Florida Everglades
Applied and Environmental Microbiology / Apr 01, 2006
Chauhan, A., & Ogram, A. (2006). Fatty Acid-Oxidizing Consortia along a Nutrient Gradient in the Florida Everglades. Applied and Environmental Microbiology, 72(4), 2400–2406. https://doi.org/10.1128/aem.72.4.2400-2406.2006
Degradation of o-Nitrobenzoate via Anthranilic Acid (o-Aminobenzoate) by Arthrobacter protophormiae: A Plasmid-Encoded New Pathway
Biochemical and Biophysical Research Communications / Jan 01, 2000
Chauhan, A., & Jain, R. K. (2000). Degradation of o-Nitrobenzoate via Anthranilic Acid (o-Aminobenzoate) by Arthrobacter protophormiae: A Plasmid-Encoded New Pathway. Biochemical and Biophysical Research Communications, 267(1), 236–244. https://doi.org/10.1006/bbrc.1999.1949
Metagenomic Assessment of the Eastern Oyster-Associated Microbiota
Genome Announcements / Oct 30, 2014
Chauhan, A., Wafula, D., Lewis, D. E., & Pathak, A. (2014). Metagenomic Assessment of the Eastern Oyster-Associated Microbiota. Genome Announcements, 2(5). https://doi.org/10.1128/genomea.01083-14
Chemotaxis of a Ralstonia sp. SJ98 toward co-metabolizable nitroaromatic compounds
Biochemical and Biophysical Research Communications / Dec 01, 2002
Pandey, G., Chauhan, A., Samanta, S. K., & Jain, R. K. (2002). Chemotaxis of a Ralstonia sp. SJ98 toward co-metabolizable nitroaromatic compounds. Biochemical and Biophysical Research Communications, 299(3), 404–409. https://doi.org/10.1016/s0006-291x(02)02601-3
A survey of deepwater horizon (DWH) oil-degrading bacteria from the Eastern oyster biome and its surrounding environment
Frontiers in Microbiology / Apr 09, 2014
Thomas, J. C., Wafula, D., Chauhan, A., Green, S. J., Gragg, R., & Jagoe, C. (2014). A survey of deepwater horizon (DWH) oil-degrading bacteria from the Eastern oyster biome and its surrounding environment. Frontiers in Microbiology, 5. https://doi.org/10.3389/fmicb.2014.00149
Impacts of Long-Term Irrigation of Domestic Treated Wastewater on Soil Biogeochemistry and Bacterial Community Structure
Applied and Environmental Microbiology / Oct 15, 2015
Wafula, D., White, J. R., Canion, A., Jagoe, C., Pathak, A., & Chauhan, A. (2015). Impacts of Long-Term Irrigation of Domestic Treated Wastewater on Soil Biogeochemistry and Bacterial Community Structure. Applied and Environmental Microbiology, 81(20), 7143–7158. https://doi.org/10.1128/aem.02188-15
Introducing the Microbes and Social Equity Working Group: Considering the Microbial Components of Social, Environmental, and Health Justice
mSystems / Aug 31, 2021
Ishaq, S. L., Parada, F. J., Wolf, P. G., Bonilla, C. Y., Carney, M. A., Benezra, A., Wissel, E., Friedman, M., DeAngelis, K. M., Robinson, J. M., Fahimipour, A. K., Manus, M. B., Grieneisen, L., Dietz, L. G., Pathak, A., Chauhan, A., Kuthyar, S., Stewart, J. D., Dasari, M. R., … Morar, N. (2021). Introducing the Microbes and Social Equity Working Group: Considering the Microbial Components of Social, Environmental, and Health Justice. MSystems, 6(4). https://doi.org/10.1128/msystems.00471-21
Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation
PLOS ONE / Aug 17, 2016
Pathak, A., Chauhan, A., Blom, J., Indest, K. J., Jung, C. M., Stothard, P., Bera, G., Green, S. J., & Ogram, A. (2016). Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation. PLOS ONE, 11(8), e0161032. https://doi.org/10.1371/journal.pone.0161032
Evaluation of support matrices for immobilization of anaerobic consortia for efficient carbon cycling in waste regeneration
Biochemical and Biophysical Research Communications / Feb 01, 2005
Chauhan, A., & Ogram, A. (2005). Evaluation of support matrices for immobilization of anaerobic consortia for efficient carbon cycling in waste regeneration. Biochemical and Biophysical Research Communications, 327(3), 884–893. https://doi.org/10.1016/j.bbrc.2004.12.083
Whole-Genome Sequences of Five Oyster-Associated Bacteria Show Potential for Crude Oil Hydrocarbon Degradation
Genome Announcements / Oct 31, 2013
Chauhan, A., Green, S., Pathak, A., Thomas, J., & Venkatramanan, R. (2013). Whole-Genome Sequences of Five Oyster-Associated Bacteria Show Potential for Crude Oil Hydrocarbon Degradation. Genome Announcements, 1(5). https://doi.org/10.1128/genomea.00802-13
Metagenomic Evaluation of Bacterial and Archaeal Diversity in the Geothermal Hot Springs of Manikaran, India
Genome Announcements / Feb 26, 2015
Bhatia, S., Batra, N., Pathak, A., Green, S. J., Joshi, A., & Chauhan, A. (2015). Metagenomic Evaluation of Bacterial and Archaeal Diversity in the Geothermal Hot Springs of Manikaran, India. Genome Announcements, 3(1). https://doi.org/10.1128/genomea.01544-14
Discrimination of bacteria from Jamaican bauxite soils using laser-induced breakdown spectroscopy
Analytical and Bioanalytical Chemistry / Aug 09, 2011
Lewis, D. E., Martinez, J., Akpovo, C. A., Johnson, L., Chauhan, A., & Edington, M. D. (2011). Discrimination of bacteria from Jamaican bauxite soils using laser-induced breakdown spectroscopy. Analytical and Bioanalytical Chemistry, 401(7), 2225–2236. https://doi.org/10.1007/s00216-011-5274-y
Physiological and Comparative Genomic Analysis of Arthrobacter sp. SRS-W-1-2016 Provides Insights on Niche Adaptation for Survival in Uraniferous Soils
Genes / Jan 11, 2018
Chauhan, A., Pathak, A., Jaswal, R., Edwards III, B., Chappell, D., Ball, C., Garcia-Sillas, R., Stothard, P., & Seaman, J. (2018). Physiological and Comparative Genomic Analysis of Arthrobacter sp. SRS-W-1-2016 Provides Insights on Niche Adaptation for Survival in Uraniferous Soils. Genes, 9(1), 31. https://doi.org/10.3390/genes9010031
Syntrophic-archaeal associations in a nutrient-impacted freshwater marsh
Journal of Applied Microbiology / Jan 01, 2006
Chauhan, A., Reddy, K. R., & Ogram, A. V. (2006). Syntrophic-archaeal associations in a nutrient-impacted freshwater marsh. Journal of Applied Microbiology, 100(1), 73–84. https://doi.org/10.1111/j.1365-2672.2005.02751.x
Microbial and Geochemical Assessment of Bauxitic Un-mined and Post-mined Chronosequence Soils from Mocho Mountains, Jamaica
Microbial Ecology / Mar 04, 2012
Lewis, D. E., Chauhan, A., White, J. R., Overholt, W., Green, S. J., Jasrotia, P., Wafula, D., & Jagoe, C. (2012). Microbial and Geochemical Assessment of Bauxitic Un-mined and Post-mined Chronosequence Soils from Mocho Mountains, Jamaica. Microbial Ecology, 64(3), 738–749. https://doi.org/10.1007/s00248-012-0020-3
Response of Bdellovibrio and Like Organisms (BALOs) to the Migration of Naturally Occurring Bacteria to Chemoattractants
Current Microbiology / Nov 17, 2006
Chauhan, A., & Williams, H. N. (2006). Response of Bdellovibrio and Like Organisms (BALOs) to the Migration of Naturally Occurring Bacteria to Chemoattractants. Current Microbiology, 53(6), 516–522. https://doi.org/10.1007/s00284-006-0292-2
Niche Partition of Bacteriovorax Operational Taxonomic Units Along Salinity and Temporal Gradients in the Chesapeake Bay Reveals Distinct Estuarine Strains
Microbial Ecology / Mar 06, 2013
Pineiro, S., Chauhan, A., Berhane, T., Athar, R., Zheng, G., Wang, C., Dickerson, T., Liang, X., Lymperopoulou, D. S., Chen, H., Christman, M., Louime, C., Babiker, W., Stine, O. C., & Williams, H. N. (2013). Niche Partition of Bacteriovorax Operational Taxonomic Units Along Salinity and Temporal Gradients in the Chesapeake Bay Reveals Distinct Estuarine Strains. Microbial Ecology, 65(3), 652–660. https://doi.org/10.1007/s00248-013-0186-3
Genomic Characterization of a Mercury Resistant Arthrobacter sp. H-02-3 Reveals the Presence of Heavy Metal and Antibiotic Resistance Determinants
Frontiers in Microbiology / Jan 17, 2020
Pathak, A., Jaswal, R., & Chauhan, A. (2020). Genomic Characterization of a Mercury Resistant Arthrobacter sp. H-02-3 Reveals the Presence of Heavy Metal and Antibiotic Resistance Determinants. Frontiers in Microbiology, 10. https://doi.org/10.3389/fmicb.2019.03039
Characterization of Bacterial and Fungal Assemblages From Historically Contaminated Metalliferous Soils Using Metagenomics Coupled With Diffusion Chambers and Microbial Traps
Frontiers in Microbiology / Jun 10, 2020
Pathak, A., Jaswal, R., Xu, X., White, J. R., Edwards, B., Hunt, J., Brooks, S., Rathore, R. S., Agarwal, M., & Chauhan, A. (2020). Characterization of Bacterial and Fungal Assemblages From Historically Contaminated Metalliferous Soils Using Metagenomics Coupled With Diffusion Chambers and Microbial Traps. Frontiers in Microbiology, 11. https://doi.org/10.3389/fmicb.2020.01024
Assessing fecal coliform fate and transport in a coastal watershed using HSPF
Water Science and Technology / Sep 01, 2012
Rolle, K., Gitau, M. W., Chen, G., & Chauhan, A. (2012). Assessing fecal coliform fate and transport in a coastal watershed using HSPF. Water Science and Technology, 66(5), 1096–1102. https://doi.org/10.2166/wst.2012.282
Growth and physiological response of Arthrobacter protophormiae RKJ100 toward higher concentrations of o-nitrobenzoate and p-hydroxybenzoate
FEMS Microbiology Letters / Jun 01, 2007
Sharma, N. K., Pandey, J., Gupta, N., & Jain, R. K. (2007). Growth and physiological response of Arthrobacter protophormiae RKJ100 toward higher concentrations of o-nitrobenzoate and p-hydroxybenzoate: Adaptive response of Arthrobacter protophormiae to aromatics. FEMS Microbiology Letters, 271(1), 65–70. https://doi.org/10.1111/j.1574-6968.2007.00697.x
Increased Diversity of Predacious Bdellovibrio-Like Organisms (BLOs) as a Function of Eutrophication in Kumaon Lakes of India
Current Microbiology / Mar 25, 2009
Chauhan, A., Fortenberry, G. Z., Lewis, D. E., & Williams, H. N. (2009). Increased Diversity of Predacious Bdellovibrio-Like Organisms (BLOs) as a Function of Eutrophication in Kumaon Lakes of India. Current Microbiology, 59(1), 1–8. https://doi.org/10.1007/s00284-009-9385-z
Composition of Methane-Oxidizing Bacterial Communities as a Function of Nutrient Loading in the Florida Everglades
Microbial Ecology / Apr 29, 2012
Chauhan, A., Pathak, A., & Ogram, A. (2012). Composition of Methane-Oxidizing Bacterial Communities as a Function of Nutrient Loading in the Florida Everglades. Microbial Ecology, 64(3), 750–759. https://doi.org/10.1007/s00248-012-0058-2
Draft Genome Sequence of Rhodococcus opacus Strain M213 Shows a Diverse Catabolic Potential
Genome Announcements / Feb 28, 2013
Pathak, A., Green, S. J., Ogram, A., & Chauhan, A. (2013). Draft Genome Sequence of Rhodococcus opacus Strain M213 Shows a Diverse Catabolic Potential. Genome Announcements, 1(1). https://doi.org/10.1128/genomea.00144-12
Metagenomic analysis of bacterial and archaeal assemblages in the soil-mousse surrounding a geothermal spring
Genomics Data / Sep 01, 2015
Bhatia, S., Batra, N., Pathak, A., Joshi, A., Souza, L., Almeida, P., & Chauhan, A. (2015). Metagenomic analysis of bacterial and archaeal assemblages in the soil-mousse surrounding a geothermal spring. Genomics Data, 5, 195–200. https://doi.org/10.1016/j.gdata.2015.05.016
Biostimulation of Estuarine Microbiota on Substrate Coated Agar Slides: A Novel Approach to Study Diversity of Autochthonous Bdellovibrio- and Like Organisms
Microbial Ecology / Oct 30, 2007
Chauhan, A., & Williams, H. N. (2007). Biostimulation of Estuarine Microbiota on Substrate Coated Agar Slides: A Novel Approach to Study Diversity of Autochthonous Bdellovibrio- and Like Organisms. Microbial Ecology, 55(4), 640–650. https://doi.org/10.1007/s00248-007-9307-1
Cellulolytic, fermentative, and methanogenic guilds in benthic periphyton mats from the Florida Everglades
FEMS Microbiology Ecology / Aug 01, 2007
Uz, I., Chauhan, A., & Ogram, A. V. (2007). Cellulolytic, fermentative, and methanogenic guilds in benthic periphyton mats from the Florida Everglades: Fermentation in Everglades periphyton. FEMS Microbiology Ecology, 61(2), 337–347. https://doi.org/10.1111/j.1574-6941.2007.00341.x
Whole Genome Sequence Analysis of an Alachlor and Endosulfan Degrading Micrococcus sp. strain 2385 Isolated from Ochlockonee River, Florida
Journal of Genomics / Jan 01, 2016
Pathak, A., Chauhan, A., Ewida, A. Y. I., & Stothard, P. (2016). Whole Genome Sequence Analysis of an Alachlor and Endosulfan Degrading Micrococcus sp. strain 2385 Isolated from Ochlockonee River, Florida. Journal of Genomics, 4, 42–47. https://doi.org/10.7150/jgen.16156
Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO 2 Gradient in the Mediterranean Sea
Genome Announcements / Feb 26, 2015
Chauhan, A., Pathak, A., Rodolfo-Metalpa, R., Milazzo, M., Green, S. J., & Hall-Spencer, J. M. (2015). Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO 2 Gradient in the Mediterranean Sea. Genome Announcements, 3(1). https://doi.org/10.1128/genomea.01543-14
Sustainable Development Tool Using Meta‐Analysis and DPSIR Framework — Application to Savannah River Basin, U.S.
JAWRA Journal of the American Water Resources Association / Oct 22, 2020
Pagan, J., Pryor, M., Deepa, R., Grace, J. M., Mbuya, O., Taylor, R., Dickson, J. O., Ibeanusi, V., Chauhan, A., Chen, G., & Anandhi, A. (2020). Sustainable Development Tool Using Meta‐Analysis and DPSIR Framework — Application to Savannah River Basin, U.S. JAWRA Journal of the American Water Resources Association, 56(6), 1059–1082. Portico. https://doi.org/10.1111/1752-1688.12872
Phycoremediation Coupled with Generation of Value-Added Products
Microbial Biodegradation and Bioremediation / Jan 01, 2014
Collins, L., Alvarez, D., & Chauhan, A. (2014). Phycoremediation Coupled with Generation of Value-Added Products. In Microbial Biodegradation and Bioremediation (pp. 341–387). Elsevier. https://doi.org/10.1016/b978-0-12-800021-2.00015-7
Soil nitrogen dynamics as an indicator for longleaf pine restoration
Restoration Ecology / Oct 04, 2017
McCaskill, G. L., Jose, S., Chauhan, A., & Ogram, A. V. (2017). Soil nitrogen dynamics as an indicator for longleaf pine restoration. Restoration Ecology, 26(2), 264–274. Portico. https://doi.org/10.1111/rec.12556
Microbial Ecology and Everglades Restoration
Critical Reviews in Environmental Science and Technology / Feb 17, 2011
Ogram, A., Chauhan, A., Inglett, K. S., Jayachandran, K., & Newman, S. (2011). Microbial Ecology and Everglades Restoration. Critical Reviews in Environmental Science and Technology, 41(sup1), 289–308. https://doi.org/10.1080/10643389.2010.531205
Is Long-Term Heavy Metal Exposure Driving Carriage of Antibiotic Resistance in Environmental Opportunistic Pathogens: A Comprehensive Phenomic and Genomic Assessment Using Serratia sp. SRS-8-S-2018
Frontiers in Microbiology / Aug 20, 2020
Gendy, S., Chauhan, A., Agarwal, M., Pathak, A., Rathore, R. S., & Jaswal, R. (2020). Is Long-Term Heavy Metal Exposure Driving Carriage of Antibiotic Resistance in Environmental Opportunistic Pathogens: A Comprehensive Phenomic and Genomic Assessment Using Serratia sp. SRS-8-S-2018. Frontiers in Microbiology, 11. https://doi.org/10.3389/fmicb.2020.01923
Announcing the Availability of a Culture Collection of Uranium-Resistant Microbial Assemblages (CURMA) Obtained from Metalliferous Soils of the Savannah River Site, USA
Microbiology Resource Announcements / Jul 23, 2020
Agarwal, M., Rathore, R. S., Black, A., Xu, X., Seaman, J., & Chauhan, A. (2020). Announcing the Availability of a Culture Collection of Uranium-Resistant Microbial Assemblages (CURMA) Obtained from Metalliferous Soils of the Savannah River Site, USA. Microbiology Resource Announcements, 9(30). https://doi.org/10.1128/mra.00551-20
"Genome-Centric Evaluation of Bacillus sp. strain –ATCC55673 and Response to Uranium Biomineralization"
Significances of Bioengineering & Biosciences / Aug 03, 2018
Ibeanusi, V. (2018). “Genome-Centric Evaluation of Bacillus sp. strain –ATCC55673 and Response to Uranium Biomineralization.” Significances of Bioengineering & Biosciences, 2(3). https://doi.org/10.31031/sbb.2018.02.000539
Current trends in algal biotechnology for the generation of sustainable biobased products
Microbial Biodegradation and Bioremediation / Jan 01, 2022
Edwards, B., Jaswal, R., Pathak, A., & Chauhan, A. (2022). Current trends in algal biotechnology for the generation of sustainable biobased products. In Microbial Biodegradation and Bioremediation (pp. 213–239). Elsevier. https://doi.org/10.1016/b978-0-323-85455-9.00031-x
Gene Determinants for Mercury Bioremediation as Revealed by Draft Genome Sequence Analysis of Stenotrophomonas sp. Strain MA5
Microbiology Resource Announcements / Apr 25, 2019
Pathak, A., Agarwal, M., Rathore, R. S., & Chauhan, A. (2019). Gene Determinants for Mercury Bioremediation as Revealed by Draft Genome Sequence Analysis of Stenotrophomonas sp. Strain MA5. Microbiology Resource Announcements, 8(17). https://doi.org/10.1128/mra.00130-19
Metagenomic evaluation of a Utah tar sand microbiota suggests the predominant hydrocarbonoclastic role of Actinobacteria
F1000Research / Oct 17, 2018
Lewis, D. E., Pathak, A., Jones, C. B., Akpovo, C., & Chauhan, A. (2018). Metagenomic evaluation of a Utah tar sand microbiota suggests the predominant hydrocarbonoclastic role of Actinobacteria. F1000Research, 7, 1650. https://doi.org/10.12688/f1000research.16126.1
Draft Genome Sequence of Serratia sp. Strain S1B, Isolated from Mercury-Contaminated Soil
Genome Announcements / Jun 21, 2018
Pathak, A., Jaswal, R., Xu, X., & Chauhan, A. (2018). Draft Genome Sequence of Serratia sp. Strain S1B, Isolated from Mercury-Contaminated Soil. Genome Announcements, 6(25). https://doi.org/10.1128/genomea.00534-18
Diversity and Distribution of Actinobacterial Aromatic Ring Oxygenase Genes Across Contrasting Soil Properties
Microbial Ecology / Oct 24, 2014
Weidow, C. A., Bae, H.-S., Chauhan, A., & Ogram, A. (2014). Diversity and Distribution of Actinobacterial Aromatic Ring Oxygenase Genes Across Contrasting Soil Properties. Microbial Ecology, 69(3), 676–683. https://doi.org/10.1007/s00248-014-0501-7
Ecological Perspective on the Associations of Syntrophic Bacteria, Methanogens and Methanotrophs in the Florida Everglades WCA-2A Soils
Microbiology of the Everglades Ecosystem / Mar 26, 2015
Ecological Perspective on the Associations of Syntrophic Bacteria, Methanogens and Methanotrophs in the Florida Everglades WCA-2A Soils. (2015). In Microbiology of the Everglades Ecosystem (pp. 408–422). CRC Press. https://doi.org/10.1201/b18253-22
Draft Genome Sequence of Mercury-Resistant Serratia sp. Strain SRS-8-S-2018
Microbiology Resource Announcements / Apr 09, 2020
Gendy, S., Pathak, A., Agarwal, M., Rathore, R. S., & Chauhan, A. (2020). Draft Genome Sequence of Mercury-Resistant Serratia sp. Strain SRS-8-S-2018. Microbiology Resource Announcements, 9(15). https://doi.org/10.1128/mra.00136-20
Elevated mortalities of triploid eastern oysters cultured off-bottom in northern Gulf of Mexico
Aquaculture / Apr 01, 2019
Wadsworth, P., Casas, S., La Peyre, J., & Walton, W. (2019). Elevated mortalities of triploid eastern oysters cultured off-bottom in northern Gulf of Mexico. Aquaculture, 505, 363–373. https://doi.org/10.1016/j.aquaculture.2019.02.068
The Ecology of Methanogenic Archaea in a Nutrient-Impacted Wetland
Advances in Environmental Microbiology / Jan 01, 2019
Ogram, A., Bae, H.-S., & Chauhan, A. (2019). The Ecology of Methanogenic Archaea in a Nutrient-Impacted Wetland. In The Structure and Function of Aquatic Microbial Communities (pp. 157–172). Springer International Publishing. https://doi.org/10.1007/978-3-030-16775-2_6
Microbiome Analysis of the Eastern Oyster As a Function of Ploidy and Seasons
Aug 10, 2023
Pathak, A., Marquez, M., Stothard, P., Chukwujindu, C., Su, J.-Q., Zhou, Y., Zhou, X.-Y., Jagoe, C. H., & Chauhan, A. (2023). Microbiome Analysis of the Eastern Oyster As a Function of Ploidy and Seasons. https://doi.org/10.1101/2023.08.10.552804
Density Functional Theory Study of Manganese doped Armchair Graphene Nanoribbon for Effective Carbon Dioxide Gas Sensing
ES Energy & Environment / Jan 01, 2022
R., J., ji, D., Chauhan, M., Choudhary, B. C., & Sharma, R. K. (2022). Density Functional Theory Study of Manganese doped Armchair Graphene Nanoribbon for Effective Carbon Dioxide Gas Sensing. ES Energy & Environment. https://doi.org/10.30919/esee8c701
Culture-based and culture-independent approach for the study of the methanogens and obligate anaerobes from different landfill sites
Frontiers in Microbiology / Jan 29, 2024
Prakash, O., Dewala, S. R., Nimonkar, Y., Patil, S. K., Chauhan, A., Yadav, A., Dhotre, D. P., & Ranade, D. R. (2024). Culture-based and culture-independent approach for the study of the methanogens and obligate anaerobes from different landfill sites. Frontiers in Microbiology, 14. https://doi.org/10.3389/fmicb.2023.1273037
Metagenome Assembled Genomes (MAG) Facilitate a Better Understanding of Microbially-mediated Heavy Metal Resistance in Soils from a Former Nuclear Materials Production Facility
Oct 23, 2023
Kommu, N., Stothard, P., Chukwujindu, C., Pathak, A., & Chauhan, A. (2023). Metagenome Assembled Genomes (MAG) Facilitate a Better Understanding of Microbially-mediated Heavy Metal Resistance in Soils from a Former Nuclear Materials Production Facility. https://doi.org/10.1101/2023.10.20.563326
Canarium schweinfurthii (Schweinfurth's olive)
CABI Compendium / Jan 07, 2022
(2022). Canarium schweinfurthii (Schweinfurth’s olive) [dataset]. In CABI Compendium. CABI Publishing. https://doi.org/10.1079/cabicompendium.11145
Corrigendum: Genomic Characterization of a Mercury Resistant Arthrobacter sp. H-02-3 Reveals the Presence of Heavy Metal and Antibiotic Resistance Determinants
Frontiers in Microbiology / May 25, 2020
Pathak, A., Jaswal, R., & Chauhan, A. (2020). Corrigendum: Genomic Characterization of a Mercury Resistant Arthrobacter sp. H-02-3 Reveals the Presence of Heavy Metal and Antibiotic Resistance Determinants. Frontiers in Microbiology, 11. https://doi.org/10.3389/fmicb.2020.01047
Draft Genome Sequence of Pseudomonas sp. Strain B1, Isolated from a Contaminated Sediment
Genome Announcements / Jun 21, 2018
Pathak, A., Jaswal, R., Stothard, P., Brooks, S., & Chauhan, A. (2018). Draft Genome Sequence of Pseudomonas sp. Strain B1, Isolated from a Contaminated Sediment. Genome Announcements, 6(25). https://doi.org/10.1128/genomea.00518-18
Profitability of Organic Vegetable Production via Sod Based Rotation and Conventional Versus Strip Tillage in the Southern Coastal Plain
Sustainable Agriculture Research / Sep 18, 2016
Ahmadiani, M., Li, C., Liu, Y., Fonsah, E. G., Bliss, C., Brodbeck, B., & Andersen, P. (2016). Profitability of Organic Vegetable Production via Sod Based Rotation and Conventional Versus Strip Tillage in the Southern Coastal Plain. Sustainable Agriculture Research, 5(4), 46. https://doi.org/10.5539/sar.v5n4p46
Applications of Image Understanding Technology in Precision Agriculture: Weed Classification, and Crop Row Guidance
Proceedings of the Third International Conference on Precision Agriculture / Nov 02, 2015
Sadjadi, F. (2015). Applications of Image Understanding Technology in Precision Agriculture: Weed Classification, and Crop Row Guidance. In ASA, CSSA, and SSSA Books (pp. 779–784). American Society of Agronomy, Crop Science Society of America, Soil Science Society of America. https://doi.org/10.2134/1996.precisionagproc3.c92
Decision Support Systems for Agrotechnology Transfer
Sustainable Agriculture Reviews / Jan 01, 2012
Sarkar, R. (2012). Decision Support Systems for Agrotechnology Transfer. In Organic Fertilisation, Soil Quality and Human Health (pp. 263–299). Springer Netherlands. https://doi.org/10.1007/978-94-007-4113-3_10
Restoration of p-nitrophenol contaminated site using Arthrobacter protophormiae and evaluation of structural dynamics of its community during the process
Journal of Biotechnology / Oct 01, 2008
Jain, R. K., Paul, D., Labana, S., Pandey, J., Ghosh, A., & Chauhan, A. (2008). Restoration of p-nitrophenol contaminated site using Arthrobacter protophormiae and evaluation of structural dynamics of its community during the process. Journal of Biotechnology, 136, S46. https://doi.org/10.1016/j.jbiotec.2008.07.095
Sustainable Urban Energy Solutions: Investigating the Solar Potential of Vertical Façades Amidst Adjacent Buildings in Kuala Lumpur, Malaysia
Journal of Advanced Research in Applied Sciences and Engineering Technology / Oct 02, 2023
Haitham Esam Rababah, Azhar Ghazali, Mohd Hafizal Mohd Isa, Zalena Abdul Aziz, & Mohamed H. S. Shaat. (2023). Sustainable Urban Energy Solutions: Investigating the Solar Potential of Vertical Façades Amidst Adjacent Buildings in Kuala Lumpur, Malaysia. Journal of Advanced Research in Applied Sciences and Engineering Technology, 32(3), 488–505. https://doi.org/10.37934/araset.32.3.488505
NNSA Minority Serving Institute Partnership Program (MSIPP)-- Partnership for Advanced Manufacturing Education and Research (PAMER) (Q1 FY2022 Progress Report)
Jan 24, 2022
Atcitty, S., Moriarty, D., & Hernandez, V. (2022). NNSA Minority Serving Institute Partnership Program (MSIPP)-- Partnership for Advanced Manufacturing Education and Research (PAMER) (Q1 FY2022 Progress Report). Office of Scientific and Technical Information (OSTI). https://doi.org/10.2172/1841656
Utilizing a Metagenome Assembled Genome Approach Revealed Further Insights into Microbially Mediated Heavy-Metal Resistance in Soils from a Former Nuclear Materials Production Facility
Applied Microbiology / Feb 13, 2024
Kommu, N., Stothard, P., Chukwujindu, C., Pathak, A., & Chauhan, A. (2024). Utilizing a Metagenome Assembled Genome Approach Revealed Further Insights into Microbially Mediated Heavy-Metal Resistance in Soils from a Former Nuclear Materials Production Facility. Applied Microbiology, 4(1), 376–389. https://doi.org/10.3390/applmicrobiol4010026
Choice of bead-beater instrument can result in significant differences in the outcome of host-associated microbiome studies
F1000Research / Sep 01, 2023
Chauhan, A., Chukwujindu, C., & Pathak, A. (2023). Choice of bead-beater instrument can result in significant differences in the outcome of host-associated microbiome studies. F1000Research, 12, 1088. https://doi.org/10.12688/f1000research.138618.1
Friend or Foe: Draft Genome Sequence of Bradyrhizobium sp. Strain SRS-191
Microbiology Resource Announcements / Nov 17, 2022
Chauhan, A., Rathore, R. S., Agarwal, M., Chauhan, A. J., & Taywade, A. (2022). Friend or Foe: Draft Genome Sequence of Bradyrhizobium sp. Strain SRS-191. Microbiology Resource Announcements, 11(11). https://doi.org/10.1128/mra.00753-22
Characterization of Microbial Communities and Naturally Occurring Radionuclides in Soilless Growth Media Amended with Different Concentrations of Biochar
Applied Microbiology / Sep 05, 2022
Osei, G. K., Abazinge, M., Ngatia, L., Chauhan, A., Bolques, A., Jagoe, C., & Pathak, A. (2022). Characterization of Microbial Communities and Naturally Occurring Radionuclides in Soilless Growth Media Amended with Different Concentrations of Biochar. Applied Microbiology, 2(3), 662–679. https://doi.org/10.3390/applmicrobiol2030051
Twenty Important Research Questions in Microbial Exposure and Social Equity
mSystems / Feb 22, 2022
Robinson, J. M., Redvers, N., Camargo, A., Bosch, C. A., Breed, M. F., Brenner, L. A., Carney, M. A., Chauhan, A., Dasari, M., Dietz, L. G., Friedman, M., Grieneisen, L., Hoisington, A. J., Horve, P. F., Hunter, A., Jech, S., Jorgensen, A., Lowry, C. A., Man, I., … Ishaq, S. L. (2022). Twenty Important Research Questions in Microbial Exposure and Social Equity. MSystems, 7(1). https://doi.org/10.1128/msystems.01240-21
Comparative Genomic Analysis of Three Pseudomonas Species Isolated from the Eastern Oyster (Crassostrea virginica) Tissues, Mantle Fluid, and the Overlying Estuarine Water Column
Microorganisms / Feb 27, 2021
Pathak, A., Stothard, P., & Chauhan, A. (2021). Comparative Genomic Analysis of Three Pseudomonas Species Isolated from the Eastern Oyster (Crassostrea virginica) Tissues, Mantle Fluid, and the Overlying Estuarine Water Column. Microorganisms, 9(3), 490. https://doi.org/10.3390/microorganisms9030490
A Rapid and High Throughput MIC Determination Method to Screen Uranium Resistant Microorganisms
Methods and Protocols / Mar 03, 2020
Agarwal, M., Rathore, R. S., & Chauhan, A. (2020). A Rapid and High Throughput MIC Determination Method to Screen Uranium Resistant Microorganisms. Methods and Protocols, 3(1), 21. https://doi.org/10.3390/mps3010021
Metagenomic Evaluation of Bacterial and Fungal Assemblages Enriched within Diffusion Chambers and Microbial Traps Containing Uraniferous Soils
Microorganisms / Sep 06, 2019
Jaswal, R., Pathak, A., & Chauhan, A. (2019). Metagenomic Evaluation of Bacterial and Fungal Assemblages Enriched within Diffusion Chambers and Microbial Traps Containing Uraniferous Soils. Microorganisms, 7(9), 324. https://doi.org/10.3390/microorganisms7090324
Metagenomics-Guided Survey, Isolation, and Characterization of Uranium Resistant Microbiota from the Savannah River Site, USA
Genes / Apr 28, 2019
Jaswal, Pathak, III, III, Seaman, Stothard, Krivushin, Blom, Rupp, & Chauhan. (2019). Metagenomics-Guided Survey, Isolation, and Characterization of Uranium Resistant Microbiota from the Savannah River Site, USA. Genes, 10(5), 325. https://doi.org/10.3390/genes10050325
Multiple Lines of Evidences Reveal Mechanisms Underpinning Mercury Resistance and Volatilization by Stenotrophomonas sp. MA5 Isolated from the Savannah River Site (SRS), USA
Cells / Apr 03, 2019
Agarwal, M., Rathore, R. S., Jagoe, C., & Chauhan, A. (2019). Multiple Lines of Evidences Reveal Mechanisms Underpinning Mercury Resistance and Volatilization by Stenotrophomonas sp. MA5 Isolated from the Savannah River Site (SRS), USA. Cells, 8(4), 309. https://doi.org/10.3390/cells8040309
Proteogenomic Analysis of Burkholderia Species Strains 25 and 46 Isolated from Uraniferous Soils Reveals Multiple Mechanisms to Cope with Uranium Stress
Cells / Dec 12, 2018
Agarwal, M., Pathak, A., Rathore, R., Prakash, O., Singh, R., Jaswal, R., Seaman, J., & Chauhan, A. (2018). Proteogenomic Analysis of Burkholderia Species Strains 25 and 46 Isolated from Uraniferous Soils Reveals Multiple Mechanisms to Cope with Uranium Stress. Cells, 7(12), 269. https://doi.org/10.3390/cells7120269
Genome-centric evaluation of Burkholderia sp. strain SRS-W-2-2016 resistant to high concentrations of uranium and nickel isolated from the Savannah River Site (SRS), USA
Genomics Data / Jun 01, 2017
Pathak, A., Chauhan, A., Stothard, P., Green, S., Maienschein-Cline, M., Jaswal, R., & Seaman, J. (2017). Genome-centric evaluation of Burkholderia sp. strain SRS-W-2-2016 resistant to high concentrations of uranium and nickel isolated from the Savannah River Site (SRS), USA. Genomics Data, 12, 62–68. https://doi.org/10.1016/j.gdata.2017.02.011
Whole genome sequence analysis of an Alachlor and Endosulfan degrading Pseudomonas strain W15Feb9B isolated from Ochlockonee River, Florida
Genomics Data / Jun 01, 2016
Chauhan, A., Pathak, A., Ewida, A. Y. I., Griffiths, Z., & Stothard, P. (2016). Whole genome sequence analysis of an Alachlor and Endosulfan degrading Pseudomonas strain W15Feb9B isolated from Ochlockonee River, Florida. Genomics Data, 8, 134–138. https://doi.org/10.1016/j.gdata.2016.05.008
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