Shree Thapa

Molecular biologist

Massachusetts

Research Expertise

Physiology
Genetics
Plant Science
Agronomy and Crop Science
Biotechnology
Molecular Biology
Soil Science
Microbiology
Bioinformatics
phylogenetics
Comparative genomics
Plant-microbe interaction, microbe-microbe interaction
Plant pathogens, endophytes

About

Analytical and results-driven molecular biologist specializing in bioinformatics, genomics and molecular biology. Proven track record in leading and managing genome sequence analysis and bacteria engineering projects to uncover genomic diversity, evolution and functional insights. Expertise in molecular biology, next-generation sequencing techniques and data analysis to unravel complex biological systems. Proficient in utilizing cutting-edge NGS technologies and bioinformatics tools for large dataset analysis. Adept at experimental design, sample preparation, and driving innovation in genomics methodologies. Demonstrates strong problem-solving and analytical skills, adept at managing multiple projects concurrently. Proactive collaborator with a strong publication record and a commitment to staying at the forefront of microbial and genomics research.

Legacy Map

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Publications

Inhibition of a conserved bacterial dual-specificity phosphatase confers plant tolerance to Candidatus Liberibacter spp
iScience
2024
Variation in microbial feature perception in the Rutaceae family with immune receptor conservation in citrus
Plant Physiology
2023
Effectors from a Bacterial Vector-Borne Pathogen Exhibit Diverse Subcellular Localization, Expression Profiles, and Manipulation of Plant Defense
Molecular Plant-Microbe Interactions®
2022
Genome analysis of Spiroplasma citri strains from different host plants and its leafhopper vectors
BMC Genomics
2021
Genome‐wide analyses of Liberibacter species provides insights into evolution, phylogenetic relationships, and virulence factors
Molecular Plant Pathology
2020
Comparative Genomics to Develop a Specific Multiplex PCR Assay for Detection of Clavibacter michiganensis
Phytopathology®
2020
The Evolution, Ecology, and Mechanisms of Infection by Gram-Positive, Plant-Associated Bacteria
Annual Review of Phytopathology
2019
A Pathogen Secreted Protein as a Detection Marker for Citrus Huanglongbing
Frontiers in Microbiology
2017
Genomic Analysis of Clavibacter michiganensis Reveals Insight Into Virulence Strategies and Genetic Diversity of a Gram-Positive Bacterial Pathogen
Molecular Plant-Microbe Interactions®
2017
Identification of QTLs controlling resistance to Pseudomonas syringae pv. tomato race 1 strains from the wild tomato, Solanum habrochaites LA1777
Theoretical and Applied Genetics
2015
Comparative genomics of JapaneseErwinia pyrifoliaestrain Ejp617 with closely related erwinias
Genome
2013

Education

Ph.D, Molecular biology, bioinformatics

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