Annabel Whibley
Bioinformatician at Bragato Research Institute based in Auckland, New Zealand.
Research Expertise
Publications
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
Nature / May 16, 2012
(2012). Butterfly genome reveals promiscuous exchange of mimicry adaptations among species. Nature, 487(7405), 94–98. https://doi.org/10.1038/nature11041
Chromosomal rearrangements maintain a polymorphic supergene controlling butterfly mimicry
Nature / Aug 14, 2011
Joron, M., Frezal, L., Jones, R. T., Chamberlain, N. L., Lee, S. F., Haag, C. R., Whibley, A., Becuwe, M., Baxter, S. W., Ferguson, L., Wilkinson, P. A., Salazar, C., Davidson, C., Clark, R., Quail, M. A., Beasley, H., Glithero, R., Lloyd, C., Sims, S., … ffrench-Constant, R. H. (2011). Chromosomal rearrangements maintain a polymorphic supergene controlling butterfly mimicry. Nature, 477(7363), 203–206. https://doi.org/10.1038/nature10341
Genomic islands of divergence in hybridizing Heliconius butterflies identified by large-scale targeted sequencing
Philosophical Transactions of the Royal Society B: Biological Sciences / Feb 05, 2012
Nadeau, N. J., Whibley, A., Jones, R. T., Davey, J. W., Dasmahapatra, K. K., Baxter, S. W., Quail, M. A., Joron, M., ffrench-Constant, R. H., Blaxter, M. L., Mallet, J., & Jiggins, C. D. (2012). Genomic islands of divergence in hybridizing Heliconius butterflies identified by large-scale targeted sequencing. Philosophical Transactions of the Royal Society B: Biological Sciences, 367(1587), 343–353. https://doi.org/10.1098/rstb.2011.0198
SLC9A6 Mutations Cause X-Linked Mental Retardation, Microcephaly, Epilepsy, and Ataxia, a Phenotype Mimicking Angelman Syndrome
The American Journal of Human Genetics / Apr 01, 2008
Gilfillan, G. D., Selmer, K. K., Roxrud, I., Smith, R., Kyllerman, M., Eiklid, K., Kroken, M., Mattingsdal, M., Egeland, T., Stenmark, H., Sjøholm, H., Server, A., Samuelsson, L., Christianson, A., Tarpey, P., Whibley, A., Stratton, M. R., Futreal, P. A., Teague, J., … Strømme, P. (2008). SLC9A6 Mutations Cause X-Linked Mental Retardation, Microcephaly, Epilepsy, and Ataxia, a Phenotype Mimicking Angelman Syndrome. The American Journal of Human Genetics, 82(4), 1003–1010. https://doi.org/10.1016/j.ajhg.2008.01.013
Disruption at the PTCHD1 Locus on Xp22.11 in Autism Spectrum Disorder and Intellectual Disability
Science Translational Medicine / Sep 15, 2010
Noor, A., Whibley, A., Marshall, C. R., Gianakopoulos, P. J., Piton, A., Carson, A. R., Orlic-Milacic, M., Lionel, A. C., Sato, D., Pinto, D., Drmic, I., Noakes, C., Senman, L., Zhang, X., Mo, R., Gauthier, J., Crosbie, J., Pagnamenta, A. T., … Munson, J. (2010). Disruption at the PTCHD1 Locus on Xp22.11 in Autism Spectrum Disorder and Intellectual Disability. Science Translational Medicine, 2(49). https://doi.org/10.1126/scitranslmed.3001267
Submicroscopic Duplications of the Hydroxysteroid Dehydrogenase HSD17B10 and the E3 Ubiquitin Ligase HUWE1 Are Associated with Mental Retardation
The American Journal of Human Genetics / Feb 01, 2008
Froyen, G., Corbett, M., Vandewalle, J., Jarvela, I., Lawrence, O., Meldrum, C., Bauters, M., Govaerts, K., Vandeleur, L., Van Esch, H., Chelly, J., Sanlaville, D., van Bokhoven, H., Ropers, H.-H., Laumonnier, F., Ranieri, E., Schwartz, C. E., Abidi, F., Tarpey, P. S., … Gécz, J. (2008). Submicroscopic Duplications of the Hydroxysteroid Dehydrogenase HSD17B10 and the E3 Ubiquitin Ligase HUWE1 Are Associated with Mental Retardation. The American Journal of Human Genetics, 82(2), 432–443. https://doi.org/10.1016/j.ajhg.2007.11.002
The gene cortex controls mimicry and crypsis in butterflies and moths
Nature / Jun 01, 2016
Nadeau, N. J., Pardo-Diaz, C., Whibley, A., Supple, M. A., Saenko, S. V., Wallbank, R. W. R., Wu, G. C., Maroja, L., Ferguson, L., Hanly, J. J., Hines, H., Salazar, C., Merrill, R. M., Dowling, A. J., ffrench-Constant, R. H., Llaurens, V., Joron, M., McMillan, W. O., & Jiggins, C. D. (2016). The gene cortex controls mimicry and crypsis in butterflies and moths. Nature, 534(7605), 106–110. https://doi.org/10.1038/nature17961
Evolutionary Paths Underlying Flower Color Variation in Antirrhinum
Science / Aug 18, 2006
Whibley, A. C., Langlade, N. B., Andalo, C., Hanna, A. I., Bangham, A., Thébaud, C., & Coen, E. (2006). Evolutionary Paths Underlying Flower Color Variation in Antirrhinum. Science, 313(5789), 963–966. https://doi.org/10.1126/science.1129161
Fine-Scale Survey of X Chromosome Copy Number Variants and Indels Underlying Intellectual Disability
The American Journal of Human Genetics / Aug 01, 2010
Whibley, A. C., Plagnol, V., Tarpey, P. S., Abidi, F., Fullston, T., Choma, M. K., Boucher, C. A., Shepherd, L., Willatt, L., Parkin, G., Smith, R., Futreal, P. A., Shaw, M., Boyle, J., Licata, A., Skinner, C., Stevenson, R. E., Turner, G., Field, M., … Raymond, F. L. (2010). Fine-Scale Survey of X Chromosome Copy Number Variants and Indels Underlying Intellectual Disability. The American Journal of Human Genetics, 87(2), 173–188. https://doi.org/10.1016/j.ajhg.2010.06.017
Genetic architecture and balancing selection: the life and death of differentiated variants
Molecular Ecology / Mar 06, 2017
Llaurens, V., Whibley, A., & Joron, M. (2017). Genetic architecture and balancing selection: the life and death of differentiated variants. Molecular Ecology, 26(9), 2430–2448. Portico. https://doi.org/10.1111/mec.14051
Supergene Evolution Triggered by the Introgression of a Chromosomal Inversion
Current Biology / Jun 01, 2018
Jay, P., Whibley, A., Frézal, L., Rodríguez de Cara, M. Á., Nowell, R. W., Mallet, J., Dasmahapatra, K. K., & Joron, M. (2018). Supergene Evolution Triggered by the Introgression of a Chromosomal Inversion. Current Biology, 28(11), 1839-1845.e3. https://doi.org/10.1016/j.cub.2018.04.072
CASK mutations are frequent in males and cause X-linked nystagmus and variable XLMR phenotypes
European Journal of Human Genetics / Dec 23, 2009
Hackett, A., Tarpey, P. S., Licata, A., Cox, J., Whibley, A., Boyle, J., Rogers, C., Grigg, J., Partington, M., Stevenson, R. E., Tolmie, J., Yates, J. R., Turner, G., Wilson, M., Futreal, A. P., Corbett, M., Shaw, M., Gecz, J., Raymond, F. L., … Abidi, F. E. (2009). CASK mutations are frequent in males and cause X-linked nystagmus and variable XLMR phenotypes. European Journal of Human Genetics, 18(5), 544–552. https://doi.org/10.1038/ejhg.2009.220
Mutation load at a mimicry supergene sheds new light on the evolution of inversion polymorphisms
Nature Genetics / Jan 25, 2021
Jay, P., Chouteau, M., Whibley, A., Bastide, H., Parrinello, H., Llaurens, V., & Joron, M. (2021). Mutation load at a mimicry supergene sheds new light on the evolution of inversion polymorphisms. Nature Genetics, 53(3), 288–293. https://doi.org/10.1038/s41588-020-00771-1
Genome structure and evolution of Antirrhinum majus L
Nature Plants / Jan 28, 2019
Li, M., Zhang, D., Gao, Q., Luo, Y., Zhang, H., Ma, B., Chen, C., Whibley, A., Zhang, Y., Cao, Y., Li, Q., Guo, H., Li, J., Song, Y., Zhang, Y., Copsey, L., Li, Y., Li, X., Qi, M., … Xue, Y. (2019). Genome structure and evolution of Antirrhinum majus L. Nature Plants, 5(2), 174–183. https://doi.org/10.1038/s41477-018-0349-9
Evolution of dominance mechanisms at a butterfly mimicry supergene
Nature Communications / Nov 27, 2014
Le Poul, Y., Whibley, A., Chouteau, M., Prunier, F., Llaurens, V., & Joron, M. (2014). Evolution of dominance mechanisms at a butterfly mimicry supergene. Nature Communications, 5(1). https://doi.org/10.1038/ncomms6644
Mutations in Cullin 4B result in a human syndrome associated with increased camptothecin-induced topoisomerase I-dependent DNA breaks
Human Molecular Genetics / Jan 11, 2010
Kerzendorfer, C., Whibley, A., Carpenter, G., Outwin, E., Chiang, S.-C., Turner, G., Schwartz, C., El-Khamisy, S., Raymond, F. L., & O’Driscoll, M. (2010). Mutations in Cullin 4B result in a human syndrome associated with increased camptothecin-induced topoisomerase I-dependent DNA breaks. Human Molecular Genetics, 19(7), 1324–1334. https://doi.org/10.1093/hmg/ddq008
Selection and gene flow shape genomic islands that control floral guides
Proceedings of the National Academy of Sciences / Oct 08, 2018
Tavares, H., Whibley, A., Field, D. L., Bradley, D., Couchman, M., Copsey, L., Elleouet, J., Burrus, M., Andalo, C., Li, M., Li, Q., Xue, Y., Rebocho, A. B., Barton, N. H., & Coen, E. (2018). Selection and gene flow shape genomic islands that control floral guides. Proceedings of the National Academy of Sciences, 115(43), 11006–11011. https://doi.org/10.1073/pnas.1801832115
Conservatism and novelty in the genetic architecture of adaptation in Heliconius butterflies
Heredity / Mar 25, 2015
Huber, B., Whibley, A., Poul, Y. L., Navarro, N., Martin, A., Baxter, S., Shah, A., Gilles, B., Wirth, T., McMillan, W. O., & Joron, M. (2015). Conservatism and novelty in the genetic architecture of adaptation in Heliconius butterflies. Heredity, 114(5), 515–524. https://doi.org/10.1038/hdy.2015.22
Deletion of MAOA and MAOB in a male patient causes severe developmental delay, intermittent hypotonia and stereotypical hand movements
European Journal of Human Genetics / May 19, 2010
Whibley, A., Urquhart, J., Dore, J., Willatt, L., Parkin, G., Gaunt, L., Black, G., Donnai, D., & Raymond, F. L. (2010). Deletion of MAOA and MAOB in a male patient causes severe developmental delay, intermittent hypotonia and stereotypical hand movements. European Journal of Human Genetics, 18(10), 1095–1099. https://doi.org/10.1038/ejhg.2010.41
Evolution of flower color pattern through selection on regulatory small RNAs
Science / Nov 17, 2017
Bradley, D., Xu, P., Mohorianu, I.-I., Whibley, A., Field, D., Tavares, H., Couchman, M., Copsey, L., Carpenter, R., Li, M., Li, Q., Xue, Y., Dalmay, T., & Coen, E. (2017). Evolution of flower color pattern through selection on regulatory small RNAs. Science, 358(6365), 925–928. https://doi.org/10.1126/science.aao3526
Whole-genome re-sequencing of non-model organisms: lessons from unmapped reads
Heredity / Oct 01, 2014
Gouin, A., Legeai, F., Nouhaud, P., Whibley, A., Simon, J.-C., & Lemaitre, C. (2014). Whole-genome re-sequencing of non-model organisms: lessons from unmapped reads. Heredity, 114(5), 494–501. https://doi.org/10.1038/hdy.2014.85
The changing face of genome assemblies: Guidance on achieving high‐quality reference genomes
Molecular Ecology Resources / Jan 20, 2021
Whibley, A., Kelley, J. L., & Narum, S. R. (2021). The changing face of genome assemblies: Guidance on achieving high‐quality reference genomes. Molecular Ecology Resources, 21(3), 641–652. Portico. https://doi.org/10.1111/1755-0998.13312
Lessons learnt from large-scale exon re-sequencing of the X chromosome
Human Molecular Genetics / Apr 15, 2009
Raymond, F. L., Whibley, A., Stratton, M. R., & Gecz, J. (2009). Lessons learnt from large-scale exon re-sequencing of the X chromosome. Human Molecular Genetics, 18(R1), R60–R64. https://doi.org/10.1093/hmg/ddp071
WING SHAPE VARIATION ASSOCIATED WITH MIMICRY IN BUTTERFLIES
Evolution / Apr 24, 2013
Jones, R. T., Poul, Y. L., Whibley, A. C., Mérot, C., ffrench-Constant, R. H., & Joron, M. (2013). WING SHAPE VARIATION ASSOCIATED WITH MIMICRY IN BUTTERFLIES. Evolution, 67(8), 2323–2334. https://doi.org/10.1111/evo.12114
Mutation accumulation in chromosomal inversions maintains wing pattern polymorphism in a butterfly
Aug 15, 2019
Jay, P., Chouteau, M., Whibley, A., Bastide, H., Llaurens, V., Parrinello, H., & Joron, M. (2019). Mutation accumulation in chromosomal inversions maintains wing pattern polymorphism in a butterfly. https://doi.org/10.1101/736504
Genomic data of different resolutions reveal consistent inbreeding estimates but contrasting homozygosity landscapes for the threatened Aotearoa New Zealand hihi
Molecular Ecology / Jul 26, 2021
Duntsch, L., Whibley, A., Brekke, P., Ewen, J. G., & Santure, A. W. (2021). Genomic data of different resolutions reveal consistent inbreeding estimates but contrasting homozygosity landscapes for the threatened Aotearoa New Zealand hihi. Molecular Ecology, 30(23), 6006–6020. Portico. https://doi.org/10.1111/mec.16068
Sharing and reporting benefits from biodiversity research
Molecular Ecology / Nov 06, 2020
Marden, E., Abbott, R. J., Austerlitz, F., Ortiz‐Barrientos, D., Baucom, R. S., Bongaerts, P., Bonin, A., Bonneaud, C., Browne, L., Alex Buerkle, C., Caicedo, A. L., Coltman, D. W., Cruzan, M. B., Davison, A., DeWoody, J. A., Dumbrell, A. J., Emerson, B. C., Fountain‐Jones, N. M., Gillespie, R., … Rieseberg, L. H. (2020). Sharing and reporting benefits from biodiversity research. Molecular Ecology, 30(5), 1103–1107. Portico. https://doi.org/10.1111/mec.15702
Association mapping of colour variation in a butterfly provides evidence that a supergene locks together a cluster of adaptive loci
Philosophical Transactions of the Royal Society B: Biological Sciences / Jun 13, 2022
Jay, P., Leroy, M., Le Poul, Y., Whibley, A., Arias, M., Chouteau, M., & Joron, M. (2022). Association mapping of colour variation in a butterfly provides evidence that a supergene locks together a cluster of adaptive loci. Philosophical Transactions of the Royal Society B: Biological Sciences, 377(1856). https://doi.org/10.1098/rstb.2021.0193
Selection of Valid Reference Genes for Reverse Transcription Quantitative PCR Analysis inHeliconius numata(Lepidoptera: Nymphalidae)
Journal of Insect Science / Jan 01, 2016
Piron Prunier, F., Chouteau, M., Whibley, A., Joron, M., & Llaurens, V. (2016). Selection of Valid Reference Genes for Reverse Transcription Quantitative PCR Analysis inHeliconius numata(Lepidoptera: Nymphalidae). Journal of Insect Science, 16(1), 50. https://doi.org/10.1093/jisesa/iew034
Contrasting genomic and phenotypic outcomes of hybridization between pairs of mimetic butterfly taxa across a suture zone
Molecular Ecology / Apr 01, 2020
Gauthier, J., de Silva, D. L., Gompert, Z., Whibley, A., Houssin, C., Le Poul, Y., McClure, M., Lemaitre, C., Legeai, F., Mallet, J., & Elias, M. (2020). Contrasting genomic and phenotypic outcomes of hybridization between pairs of mimetic butterfly taxa across a suture zone. Molecular Ecology, 29(7), 1328–1343. Portico. https://doi.org/10.1111/mec.15403
Recurrent deletion ofZNF630at Xp11.23 is not associated with mental retardation
American Journal of Medical Genetics Part A / Mar 01, 2010
Lugtenberg, D., Zangrande-Vieira, L., Kirchhoff, M., Whibley, A. C., Oudakker, A. R., Kjaergaard, S., Vianna-Morgante, A. M., Kleefstra, T., Ruiter, M., Jehee, F. S., Ullmann, R., Schwartz, C. E., Stratton, M., Raymond, F. L., Veltman, J. A., Vrijenhoek, T., Pfundt, R., Schuurs-Hoeijmakers, J. H. M., Hehir-Kwa, J. Y., … de Brouwer, A. P. M. (2010). Recurrent deletion ofZNF630at Xp11.23 is not associated with mental retardation. American Journal of Medical Genetics Part A, 152A(3), 638–645. https://doi.org/10.1002/ajmg.a.33292
The design and application of a 50 K SNP chip for a threatened Aotearoa New Zealand passerine, the hihi
Molecular Ecology Resources / Aug 07, 2021
Lee, K. D., Millar, C. D., Brekke, P., Whibley, A., Ewen, J. G., Hingston, M., Zhu, A., & Santure, A. W. (2021). The design and application of a 50 K SNP chip for a threatened Aotearoa New Zealand passerine, the hihi. Molecular Ecology Resources, 22(1), 415–429. Portico. https://doi.org/10.1111/1755-0998.13480
Genomic signatures of inbreeding depression for a threatened Aotearoa New Zealand passerine
Molecular Ecology / Feb 05, 2023
Duntsch, L., Whibley, A., de Villemereuil, P., Brekke, P., Bailey, S., Ewen, J. G., & Santure, A. W. (2023). Genomic signatures of inbreeding depression for a threatened Aotearoa New Zealand passerine. Molecular Ecology, 32(8), 1893–1907. Portico. https://doi.org/10.1111/mec.16855
Development of microsatellite loci from a reference genome for the Neotropical butterflyHeliconius numataand its close relatives
Entomological Science / Jan 23, 2015
Chouteau, M., Whibley, A., Angers, B., & Joron, M. (2015). Development of microsatellite loci from a reference genome for the Neotropical butterflyHeliconius numataand its close relatives. Entomological Science, 18(2), 283–287. https://doi.org/10.1111/ens.12121
The origins of a novel butterfly wing patterning gene from within a family of conserved cell cycle regulators
Mar 05, 2015
Nadeau, N., Pardo-Diaz, C., Whibley, A., Supple, M. A., Wallbank, R., Wu, G. C., Maroja, L., Ferguson, L., Hines, H., Salazar, C., ffrench-Constant, R., Joron, M., McMillan, W. O., & Jiggins, C. (2015). The origins of a novel butterfly wing patterning gene from within a family of conserved cell cycle regulators. https://doi.org/10.1101/016006
Brassinosteroid coordinates cell layer interactions in plants via cell wall and tissue mechanics
Science / Jun 23, 2023
Kelly-Bellow, R., Lee, K., Kennaway, R., Barclay, J. E., Whibley, A., Bushell, C., Spooner, J., Yu, M., Brett, P., Kular, B., Cheng, S., Chu, J., Xu, T., Lane, B., Fitzsimons, J., Xue, Y., Smith, R. S., Whitewoods, C. D., & Coen, E. (2023). Brassinosteroid coordinates cell layer interactions in plants via cell wall and tissue mechanics. Science, 380(6651), 1275–1281. https://doi.org/10.1126/science.adf0752
The introduction and distribution history of the common myna (Acridotheres tristis) in New Zealand
New Zealand Journal of Zoology / Mar 12, 2023
Beesley, A., Whibley, A., Santure, A. W., & Battles, H. T. (2023). The introduction and distribution history of the common myna (Acridotheres tristis) in New Zealand. New Zealand Journal of Zoology, 1–13. https://doi.org/10.1080/03014223.2023.2182332
Balancing selection at a wing pattern locus is associated with major shifts in genome-wide patterns of diversity and gene flow
Oct 01, 2021
Rodríguez de Cara, M. Á., Jay, P., Rougemont, Q., Chouteau, M., Whibley, A., Huber, B., Piron-Prunier, F., Ramos, R. R., Freitas, A. V. L., Salazar, C., Silva-Brandão, K. L., Torres, T. T., & Joron, M. (2021). Balancing selection at a wing pattern locus is associated with major shifts in genome-wide patterns of diversity and gene flow. https://doi.org/10.1101/2021.09.29.462348
Assembly of female and male hihi genomes (stitchbird; Notiomystis cincta) enables characterization of the W chromosome and resources for conservation genomics
Molecular Ecology Resources / Jun 18, 2023
Bailey, S., Guhlin, J., Senanayake, D. S., Scherer, P., Brekke, P., Ewen, J. G., Santure, A. W., & Whibley, A. (2023). Assembly of female and male hihi genomes (stitchbird; Notiomystis cincta) enables characterization of the W chromosome and resources for conservation genomics. Molecular Ecology Resources. Portico. https://doi.org/10.1111/1755-0998.13823
Tracing the introduction of the invasive common myna using population genomics
Heredity / May 17, 2023
Atsawawaranunt, K., Ewart, K. M., Major, R. E., Johnson, R. N., Santure, A. W., & Whibley, A. (2023). Tracing the introduction of the invasive common myna using population genomics. Heredity, 131(1), 56–67. https://doi.org/10.1038/s41437-023-00621-w
MtING2 encodes an
ING domain
PHD finger protein which
affects Medicago growth, flowering, global
patterns of H3K4me3 , and gene
expression
The Plant Journal / Oct 17, 2022
Jaudal, M., Mayo‐Smith, M., Poulet, A., Whibley, A., Peng, Y., Zhang, L., Thomson, G., Trimborn, L., Jacob, Y., van Wolfswinkel, J. C., Goldstone, D. C., Wen, J., Mysore, K. S., & Putterill, J. (2022). <scp>MtING2</scp> encodes an <scp>ING</scp> domain <scp>PHD</scp> finger protein which affects Medicago growth, flowering, global patterns of <scp>H3K4me3</scp>, and gene expression. The Plant Journal, 112(4), 1029–1050. Portico. https://doi.org/10.1111/tpj.15994
Comment on "Evolutionary Paths Underlying Flower Color Variation in Antirrhinum "
Science / Jan 26, 2007
Rausher, M. D. (2007). Comment on "Evolutionary Paths Underlying Flower Color Variation in Antirrhinum ". Science, 315(5811), 461–461. https://doi.org/10.1126/science.1136073
Balancing selection at a wing pattern locus is associated with major shifts in genome-wide patterns of diversity and gene flow
Peer Community Journal / Jul 28, 2023
Rodríguez de Cara, M. Á., Jay, P., Rougemont, Q., Chouteau, M., Whibley, A., Huber, B., Piron-Prunier, F., Ramos, R. R., Freitas, A. V. L., Salazar, C., Silva-Brandão, K. L., Torres, T. T., & Joron, M. (2023). Balancing selection at a wing pattern locus is associated with major shifts in genome-wide patterns of diversity and gene flow. Peer Community Journal, 3. https://doi.org/10.24072/pcjournal.298
Subtle Introgression Footprints at the End of the Speciation Continuum in a Clade of Heliconius Butterflies
Molecular Biology and Evolution / Jul 01, 2023
Rougemont, Q., Huber, B., Martin, S. H., Whibley, A., Estrada, C., Solano, D., Orpet, R., McMillan, W. O., Frérot, B., & Joron, M. (2023). Subtle Introgression Footprints at the End of the Speciation Continuum in a Clade of Heliconius Butterflies. Molecular Biology and Evolution, 40(7). https://doi.org/10.1093/molbev/msad166
First chromosome scale genomes of ithomiine butterflies (Nymphalidae: Ithomiini): Comparative models for mimicry genetic studies
Molecular Ecology Resources / Jan 27, 2023
Gauthier, J., Meier, J., Legeai, F., McClure, M., Whibley, A., Bretaudeau, A., Boulain, H., Parrinello, H., Mugford, S. T., Durbin, R., Zhou, C., McCarthy, S., Wheat, C. W., Piron‐Prunier, F., Monsempes, C., François, M., Jay, P., Noûs, C., Persyn, E., … Elias, M. (2023). First chromosome scale genomes of ithomiine butterflies (Nymphalidae: Ithomiini): Comparative models for mimicry genetic studies. Molecular Ecology Resources, 23(4), 872–885. Portico. https://doi.org/10.1111/1755-0998.13749
The genome of a globally invasive passerine, the common myna (Acridotheres tristis)
Aug 23, 2023
Stuart, K. C., Johnson, R. N., Major, R., Atsawawaranunt, K., Ewart, K. M., Rollins, L. A., Santure, A. W., & Whibley, A. (2023). The genome of a globally invasive passerine, the common myna (Acridotheres tristis). https://doi.org/10.1101/2023.08.22.554353
Genetic control of cell layer interactions in plants via tissue mechanics
Feb 15, 2023
Kelly-Bellow, R., Lee, K., Kennaway, R., Barclay, E., Whibley, A., Bushell, C., Spooner, J., Yu, M., Brett, P., Kular, B., Cheng, S., Chu, J., Xu, T., Lane, B., Fitzsimons, J., Xue, Y., Smith, R., Whitewoods, C. D., & Coen, E. (2023). Genetic control of cell layer interactions in plants via tissue mechanics. https://doi.org/10.1101/2023.02.14.527838
Supergene formation: evidence for recombination suppression among multiple functional loci within inversions
Dec 17, 2021
Jay, P., Leroy, M., Le Poul, Y., Whibley, A., Arias, M., Chouteau, M., & Joron, M. (2021). Supergene formation: evidence for recombination suppression among multiple functional loci within inversions. https://doi.org/10.1101/2021.12.16.472922
Genome insights give cause for optimism in the ongoing battle to save the vaquita
Molecular Ecology Resources / Feb 22, 2021
Whibley, A. (2021). Genome insights give cause for optimism in the ongoing battle to save the vaquita. Molecular Ecology Resources, 21(4), 1005–1007. Portico. https://doi.org/10.1111/1755-0998.13345
Genome structure and evolution ofAntirrhnum majusL
Oct 15, 2018
Li, M., Zhang, D., Zhang, H., Gao, Q., Ma, B., Chen, C., Luo, Y., Cao, Y., Li, Q., Zhang, Y., Guo, H., Li, J., Song, Y., Zhang, Y., Copsey, L., Whibley, A., Li, Y., qi, M., Wang, J., … Xue, Y. (2018). Genome structure and evolution ofAntirrhnum majusL. https://doi.org/10.1101/443515
The evolution and genomic consequences of adaptive inversion polymorphism in butterflies
2016 International Congress of Entomology / Jan 01, 2016
Joron, M. (2016). The evolution and genomic consequences of adaptive inversion polymorphism in butterflies. 2016 International Congress of Entomology. https://doi.org/10.1603/ice.2016.94620
Stripes, sex and sparrows: what processes underlie heteromorphic chromosome evolution?
Heredity / Aug 18, 2010
Joron, M., & Whibley, A. (2010). Stripes, sex and sparrows: what processes underlie heteromorphic chromosome evolution? Heredity, 106(4), 531–532. https://doi.org/10.1038/hdy.2010.106
High-resolution genomic microarrays for X-linked mental retardation
Genetics in Medicine / Sep 01, 2007
Lugtenberg, D., Veltman, J. A., & van Bokhoven, H. (2007). High-resolution genomic microarrays for X-linked mental retardation. Genetics in Medicine, 9(9), 560–565. https://doi.org/10.1097/gim.0b013e318149e647
Response to Comment on "Evolutionary Paths Underlying Flower Color Variation in Antirrhinum "
Science / Jan 26, 2007
Whibley, A. C., Langlade, N. B., Andalo, C., Hanna, A. I., Bangham, A., Thébaud, C., & Coen, E. (2007). Response to Comment on "Evolutionary Paths Underlying Flower Color Variation in Antirrhinum ". Science, 315(5811), 461–461. https://doi.org/10.1126/science.1136394
Supergene evolution triggered by the introgression of a chromosomal inversion
Dec 14, 2017
Jay, P., Whibley, A., Frezal, L., de Cara, A., Nowell, R. W., Mallet, J., Dasmahapatra, K. K., & Joron, M. (2017). Supergene evolution triggered by the introgression of a chromosomal inversion. https://doi.org/10.1101/234559
Education
University of Oxford
BA, Biological Sciences / July, 2000
University of East Anglia
PhD, Plant Molecular and Evolutionary Genetics / October, 2004
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