Work with thought leaders and academic experts from University of Calcutta

I am a dedicated Scientist-I at Garuda Therapeutics, where I specialize in computational biology and genomics within the R&D department. My work primarily revolves around developing and optimizing pipelines for variant calling using Strelka2 and GATK4 with Whole Genome Sequencing (WGS) to identify oncogenes in human induced pluripotent stem cells (iPSCs). This involves extensive work in the qualification and validation of these pipelines for regulatory filings, as well as leveraging databases such as ClinVar, COSMIC, and DepMap to craft targeted oncogenes panels for deep sequencing. I also apply Next-Generation Sequencing (NGS) for downstream sequencing to validate CRISPR knockouts, including the identification and validation of CRISPR off-targets using techniques like rhAMPseq and Induce-seq. Additionally, my expertise extends to single-cell sequencing analysis and understanding structural variants with Optical Genome Mapping (Bionano). Prior to joining Garuda Therapeutics, I completed a postdoctoral fellowship in computational biology at Pennsylvania State University, where I honed my skills in identifying climate-adaptive variants and conducted Genome-Wide Association Studies (GWAS) to uncover resistance genes against parasites and other stressors. My academic journey began at the University of Vermont, where I explored abiotic stress resistance genes using transcriptomics and developed a robust understanding of RNA-seq data analysis, from assembly to gene annotation. My work is driven by a passion for leveraging computational and genomics tools to address pressing challenges in biology and healthcare, combining my rigorous academic training with a practical, solution-oriented approach to research and development.

SANDIP MUKHERJEE is a highly accomplished scientist with a Ph.D in Biotechnology from the University of Calcutta. He obtained his degree in 2015 and has since then gained extensive experience in the field of biotechnology. His education and experience have equipped him with a strong foundation in the fundamentals of biotechnology and have enabled him to become an expert in the field. After completing his Ph.D, SANDIP MUKHERJEE worked as a Postdoctoral Researcher at Baylor University Medical Center and University of Texas Southwestern Medical Center. During this time, he conducted research on various topics such as cancer biology, stem cells, and regenerative medicine. His research has been published in several renowned scientific journals, showcasing his ability to produce high-quality and impactful research. Following his postdoctoral positions, SANDIP MUKHERJEE joined Nektar Therapeutics as a Scientist where he played a key role in developing new drug delivery technologies. He then moved on to Nurix Therapeutics as a Scientist II, where he focused on developing novel therapies for cancer and autoimmune diseases. His contributions to both companies have been instrumental in advancing their research and development efforts. SANDIP MUKHERJEE's expertise lies in various areas of biotechnology including molecular biology, cell biology, protein engineering, and drug development. He is known for his innovative thinking, attention to detail, and strong analytical skills, which have helped him excel in his career. In addition to his professional achievements, SANDIP MUKHERJEE is also passionate about mentoring and educating the next generation of scientists. He has served as a guest lecturer at several universities and has mentored numerous students and young researchers. Overall, SANDIP MUKHERJEE is a highly skilled and accomplished scientist with a strong passion for biotechnology. His education, experience, and contributions to the field make him a valuable asset to any organization.

Saikat Debnath is a highly qualified physicist with a Ph.D. in Physics from the University of Calcutta in 2016 and a Master of Science in Physics from IIT Bombay in 2009. He has a strong academic background and gained valuable research experience from his postdoctoral positions at prestigious institutions such as ICTP in Italy and JNCASR in Bangalore. Saikat's research interests lie in condensed matter physics, and he has published several papers in renowned journals. He is also a skilled teacher and has served as an Assistant Professor at M. V. College, where he has imparted his knowledge and expertise to students. Aside from his academic pursuits, Saikat is passionate about spreading awareness about the importance of science and promoting scientific thinking in the community. He has organized and participated in various outreach programs and workshops to engage young minds in science. With his strong educational background, research experience, and passion for teaching and promoting science, Saikat Debnath is a well-rounded physicist who has made significant contributions to the field.

Structural Geologist