Work with thought leaders and academic experts from University of Vermont

I am a dedicated Scientist-I at Garuda Therapeutics, where I specialize in computational biology and genomics within the R&D department. My work primarily revolves around developing and optimizing pipelines for variant calling using Strelka2 and GATK4 with Whole Genome Sequencing (WGS) to identify oncogenes in human induced pluripotent stem cells (iPSCs). This involves extensive work in the qualification and validation of these pipelines for regulatory filings, as well as leveraging databases such as ClinVar, COSMIC, and DepMap to craft targeted oncogenes panels for deep sequencing. I also apply Next-Generation Sequencing (NGS) for downstream sequencing to validate CRISPR knockouts, including the identification and validation of CRISPR off-targets using techniques like rhAMPseq and Induce-seq. Additionally, my expertise extends to single-cell sequencing analysis and understanding structural variants with Optical Genome Mapping (Bionano). Prior to joining Garuda Therapeutics, I completed a postdoctoral fellowship in computational biology at Pennsylvania State University, where I honed my skills in identifying climate-adaptive variants and conducted Genome-Wide Association Studies (GWAS) to uncover resistance genes against parasites and other stressors. My academic journey began at the University of Vermont, where I explored abiotic stress resistance genes using transcriptomics and developed a robust understanding of RNA-seq data analysis, from assembly to gene annotation. My work is driven by a passion for leveraging computational and genomics tools to address pressing challenges in biology and healthcare, combining my rigorous academic training with a practical, solution-oriented approach to research and development.

I am a developmental psychologist and professor with wide-ranging research expertise. My publications span infancy, childhood, & adolescence. I've been the PI on two NIH grants, and have worked with industry and the media applying and translating developmental science for product development, marketing, and as a free-lance science writer. <br>

Dr. Jonathan Melman is a highly experienced chemist with a focus on inorganic chemistry and materials applications. He received his Ph.D. in Inorganic Chemistry from Rutgers in 2003 and went on to complete post-doctoral studies in Nanomaterials and Inorganic Chemistry at the University of Vermont in 2005. Dr. Melman has a strong background in industry, having worked in various roles at companies such as GE Current and Intematix, and especially at Lumenari, which he co-founded. He currently provides consulting and contract research services as he continues to innovate and develop new technologies. Dr. Melman is known for his expertise in Phosphors, Rare Earth Materials, and Inorganic Chemistry, as well as LED Lighting and Display Technologies. He is experienced in dealing with intellectual property, and 14 issued US patents. He is a driven and dedicated scientist who is passionate about pushing the boundaries of inorganic chemistry and finding practical applications for his research.

Megan Harlow is a highly educated and experienced academic in the field of English and Media Philosophy. She holds a PhD in English from George Washington University and an ABD PhD in Media Philosophy from European Graduate School. She also has a Masters in Communication from Kansas State University and a Bachelors in Political Science from University of Vermont. In addition to her extensive education, Megan has also gained valuable experience through her various academic roles. She has served as a Graduate Teaching Assistant at George Washington University and as an Adjunct Faculty at several institutions, including University of Vermont, Southern New Hampshire University, Eastern Gateway Community College, Castleton University, and Lord Fairfax Community College. Megan has also worked as a Senior Content Editor at European Graduate School and as a Visiting Lecturer at Tampere University. She has also been involved in debate, serving as a Debate Faculty at University of Ljubljana, Debate Coach at Bard College, and Debate Instructor at University of Duhok. With her strong academic background and diverse experience, Megan is a valuable asset to any academic institution or organization. She is dedicated to promoting knowledge and critical thinking through her teaching and research, and is committed to making a positive impact in the academic community.

My name is Owen Hudson, I’m currently a PhD candidate in Plant Pathology at the University of Florida and I expect to complete my degree in December 2024. In my current position at the University of Florida, I study Fusarium ear rot of maize, specifically genomic methods to improve disease resistance breeding, identification of disease-related genes, and high throughput plant phenotyping. While my degree will be in plant pathology, my activities have been more focused on plant breeding and bioinformatics, specifically quantitative genetics, comparative genomics, and genomic selection models. I now employ Linux/Bash, R, and Python regularly in my research and analysis, and I have included machine learning and predictive proteomics in my research. In my PhD, I build a machine to image maize ears and developed several machine learning classification models for disease prediction estimates on those images. I've also built machine learning models with the USDA-ARS to identify the most influential protein domains in specific microbial groups to predict their life habit (pathogenic, saprophytic, etc.) and then use the model to predict unknown fungi. I also was able to modify the model for use in my own dataset and improve my comparative genomic methods.